运行R CMD检查时未找到R包测试

时间:2015-11-20 06:37:54

标签: r testthat

我正在使用testthat包为我的R包编写测试。我按照http://r-pkgs.had.co.nz/tests.html的说明(我相信)。我用了

devtools::use_testthat()

设置测试骨架。我在tests/testthat中创建了一个测试文件,文件名以test开头。当我在RStudio中运行devtools::test()或Ctrl + Shift + T时,测试成功运行,但是当我运行R CMD check或Ctrl + Shift + E时,testthat无法找到我的包。我收到了错误

> library(testthat)
> 
> test_check("foo")
Loading required package: foo
Error in loadNamespace(name) : there is no package called 'foo'
Calls: test_check ... tryCatch -> tryCatchList -> tryCatchOne -> <Anonymous>
In addition: Warning message:
In library(package, lib.loc = lib.loc, character.only = TRUE, logical.return = TRUE,  :
  there is no package called 'foo'
Execution halted

我通过在R_LIBS_SITE文件中设置.Renviron来修改我的库路径。我怀疑在运行R CMD check时没有阅读,但我认为它不应该有所作为。

当我从RStudio控制台运行devtools::check()时,它成功完成(包括测试),但运行Check in RStudio失败。

我向testthat.R添加了一些调试以打印出.libPaths()和其他位:

> library(testthat)
> .libPaths()
[1] "C:/Users/timk/AppData/Local/Temp/Rtmp841w0b/RLIBS_1790551706"
[2] "C:/Program Files/R/R-3.2.2/library"
> list.files(.libPaths()[1])
 [1] "KernSmooth" "MASS"       "Matrix"     "boot"       "class"
 [6] "cluster"    "crayon"     "digest"     "foo"        "foreign"
[11] "lattice"    "magrittr"   "memoise"    "mgcv"       "nlme"
[16] "nnet"       "praise"     "rpart"      "spatial"    "stringi"
[21] "stringr"    "survival"   "testthat"
> list.files(file.path(.libPaths()[1], "foo"))
character(0)
> list.files(file.path(.libPaths()[1], "testthat"))
 [1] "CITATION"    "DESCRIPTION" "INDEX"       "LICENSE"     "MD5"
 [6] "Meta"        "NAMESPACE"   "R"           "help"        "html"
[11] "libs"

您可以看到包目录是在临时库中创建的,但包是空的。将其与testthat的文件列表进行比较。

我还尝试下载另一个使用testthatanonymizer)的软件包并收到同样的错误。

sessionInfo()

R version 3.2.2 (2015-08-14)
Platform: x86_64-w64-mingw32/x64 (64-bit)
Running under: Windows 8 x64 (build 9200)

locale:
[1] LC_COLLATE=English_Australia.1252  LC_CTYPE=English_Australia.1252    LC_MONETARY=English_Australia.1252
[4] LC_NUMERIC=C                       LC_TIME=English_Australia.1252    

attached base packages:
 [1] stats     graphics  grDevices utils     datasets  methods   base     

other attached packages:
 [1] foo_0.1  testthat_0.11.0

loaded via a namespace (and not attached):
 [1] magrittr_1.5   tools_3.2.2    roxygen2_5.0.0 Rcpp_0.12.1    crayon_1.3.1   memoise_0.2.1  stringi_1.0-1 
 [8] stringr_1.0.0  digest_0.6.8   devtools_1.9.1

2 个答案:

答案 0 :(得分:0)

尝试在testthat的{​​{1}}字段中添加Suggests:。 R CMD CHECK只会在检查期间将该文件中提到的包放在范围内。

答案 1 :(得分:0)

你似乎忘了这行

library(foo)

在你的testthat文件中。如果我看一些renowned examples,他们会这样做