match.arg(position)中的错误:'arg'必须为NULL或字符向量

时间:2015-07-10 15:30:39

标签: shiny rstudio ggvis

我正在尝试开发一个闪亮的应用程序,其中有多个选项卡上的数据输入。每个选项卡下的内容可以自行运行,但是当我尝试将它们组合到一个应用程序中时,我仍然会收到此错误。 match.arg(position)中的错误:'arg'必须为NULL或字符向量。我的代码如下:

library(shiny)
library(shinydashboard)
library(ggvis)
sidebar <- dashboardSidebar(
  hr(),
  sidebarMenu(id="tabs",
              menuItem("Import Data", tabName = "Import", icon=icon("list-alt")),
              menuItem("Bivariate Regression", tabName="Bivariate Regression", icon=icon("line-chart")),
              menuItem("Contingency", tabName = "Contingency", icon = icon("table"))
  ))

  body <- dashboardBody(
    tabItems(      
      tabItem(tabName= "Import",
              sidebarLayout(
                sidebarPanel(
                  fileInput("file","Upload the file"), 
                  tags$hr(),
                  h5(helpText("Select the table parameters below")),
                  checkboxInput(inputId = 'header', label= 'Header', value= TRUE),
                  checkboxInput(inputId = "stringsAsFactors", "stringsAsFactors", FALSE),
                  br(),
                  radioButtons(inputId = 'sep', label = 'Seperator', choices = c(Comma=',', Semicolon=';', Tab='\t', Space= ' '), selected= ',')
                ),
                mainPanel(
                  uiOutput("tb")
                )
              )),

      tabItem(tabName= "Bivariate Regression",
              sidebarLayout(
                div(),
                sidebarPanel(
                  fileInput('datfile', ''),
                  selectInput('x', 'x:' ,'x'),
                  selectInput('y', 'y:', 'y'),
                  uiOutput("plot_ui")
                ),
                mainPanel(
                  titlePanel("Plot Output"),
                  ggvisOutput("plot")
                )
              ))
    ))


dashboardPage(
 dashboardHeader(title = "COBE Dashboard"),
  sidebar,
  body)

和服务器

library(shiny)
library(dplyr)
library(ggvis)
shinyServer(function(input, output){   
  #read the data and give import prefrences  
  data <- reactive({
    file1 <- input$file
    if(is.null(file1)){return()}
    read.table(file=file1$datapath, sep= input$sep, header= input$header, stringsAsFactors= input$stringsAsFactors)
  })

  # display summary of table output
  output$filledf <-renderTable({
    if(is.null(data())){return ()}
    input$file
  })

  output$sum <- renderTable({
    if(is.null(data())){return ()}
    summary(data())

  })
  output$table <- renderTable({
    if(is.null(data())){return ()}
    data()

  })

  #generate tabsets when the file is loaded. 
  output$tb <- renderUI({
    if(is.null(data()))
      h2("App powered by", tags$img(src='Blue.png', height= 100, width=250))
    else
      tabsetPanel(tabPanel("About file", tableOutput("filledf")), tabPanel("Data", tableOutput("table")), tabPanel("Summary", tableOutput("sum")))
  })
########## Data import end #########

    ########## Bivariate regression begin ###########
    #load the data when the user inputs a file
  theData <- reactive({
    infile <- input$datfile        
    if(is.null(infile))
      return(NULL)        
    d <- read.csv(infile$datapath, header = T)
    d        
  })

  # dynamic variable names
  observe({
    data<-theData()
    updateSelectInput(session, 'x', choices = names(data))
    updateSelectInput(session, 'y', choices = names(data))

  }) # end observe

  #gets the y variable name, will be used to change the plot legends
  yVarName<-reactive({
    input$y
  })

  #gets the x variable name, will be used to change the plot legends
  xVarName<-reactive({
    input$x
  })

  #make the filteredData frame

  filteredData<-reactive({
    data<-isolate(theData())
    #if there is no input, make a dummy dataframe
    if(input$x=="x" && input$y=="y"){
      if(is.null(data)){
        data<-data.frame(x=0,y=0)
      }
    }else{
      data<-data[,c(input$x,input$y)]
      names(data)<-c("x","y")
    }
    data
  })

  #plot the ggvis plot in a reactive block so that it changes with filteredData
  vis<-reactive({
    plotData<-filteredData()
    plotData %>%
      ggvis(~x, ~y) %>%
      layer_points() %>%
      add_axis("y", title = yVarName()) %>%
      add_axis("x", title = xVarName()) %>%
      add_tooltip(function(df) format(sqrt(df$x),digits=2))
  })
  vis%>%bind_shiny("plot", "plot_ui")

 ##### add contingency table ########
  # display contingcy table output
  output$foo <- renderTable({
    if(is.null(data())){return ()}
    as.data.frame.matrix(table((data())))
  })

})

1 个答案:

答案 0 :(得分:2)

div()tabItem的第二个tabItems中有一个额外的ui.R个元素。要么提供您隐含的参数,要么删除该div()元素。另外,我在session中的shinyServer()函数中添加了server.R参数。这些更改后,应用程序运行没有任何错误。

编辑:

您忘记在tabItem函数中为Contingency添加一个tabItems()。此外,最好区分tabName和该标签的标题。根据我的经验,选项卡名称中应该没有空格,这就是为什么Bivariate Regression选项卡之前没有工作的原因。它现在应该工作正常。

更新的代码:

ui.R

library(shiny)
library(shinydashboard)
library(ggvis)
sidebar <- dashboardSidebar(
  br(),
  sidebarMenu(id="tabs",
              menuItem("Import Data", tabName = "import", icon=icon("list-alt")),
              menuItem("Bivariate Regression", tabName="bivariate_regression", icon=icon("line-chart")),
              menuItem("Contingency", tabName = "contingency", icon = icon("table"))
  ))

body <- dashboardBody(
  tabItems(      
    tabItem(tabName= "import",
            sidebarLayout(
              sidebarPanel(
                fileInput("file","Upload the file"), 
                tags$hr(),
                h5(helpText("Select the table parameters below")),
                checkboxInput(inputId = 'header', label= 'Header', value= TRUE),
                checkboxInput(inputId = "stringsAsFactors", "stringsAsFactors", FALSE),
                br(),
                radioButtons(inputId = 'sep', label = 'Seperator', choices = c(Comma=',', Semicolon=';', Tab='\t', Space= ' '), selected= ',')
              ),
              mainPanel(
                uiOutput("tb")
              )
            )),

    tabItem(tabName= "bivariate_regression",
            sidebarLayout(
              #div(),
              sidebarPanel(
                fileInput('datfile', ''),
                selectInput('x', 'x:' ,'x'),
                selectInput('y', 'y:', 'y'),
                uiOutput("plot_ui")
              ),
              mainPanel(
                titlePanel("Plot Output"),
                ggvisOutput("plot")
              )
            )),
    tabItem(tabName="contingency", h2("Contigency Tab content"))
  ))


dashboardPage(
  dashboardHeader(title = "COBE Dashboard"),
  sidebar,
  body)

server.R

library(shiny)
library(dplyr)
library(ggvis)
shinyServer(function(input, output,session){   
  #read the data and give import prefrences  
  data <- reactive({
    file1 <- input$file
    if(is.null(file1)){return()}
    read.table(file=file1$datapath, sep= input$sep, header= input$header, stringsAsFactors= input$stringsAsFactors)
  })

  # display summary of table output
  output$filledf <-renderTable({
    if(is.null(data())){return ()}
    input$file
  })

  output$sum <- renderTable({
    if(is.null(data())){return ()}
    summary(data())

  })
  output$table <- renderTable({
    if(is.null(data())){return ()}
    data()

  })

  #generate tabsets when the file is loaded. 
  output$tb <- renderUI({
    if(is.null(data()))
      h2("App powered by", tags$img(src='Blue.png', height= 100, width=250))
    else
      tabsetPanel(tabPanel("About file", tableOutput("filledf")), tabPanel("Data", tableOutput("table")), tabPanel("Summary", tableOutput("sum")))
  })
  ########## Data import end #########

  ########## Bivariate regression begin ###########
  #load the data when the user inputs a file
  theData <- reactive({
    infile <- input$datfile        
    if(is.null(infile))
      return(NULL)        
    d <- read.csv(infile$datapath, header = T)
    d        
  })

  # dynamic variable names
  observe({
    data<-theData()
    updateSelectInput(session, 'x', choices = names(data))
    updateSelectInput(session, 'y', choices = names(data))

  }) # end observe

  #gets the y variable name, will be used to change the plot legends
  yVarName<-reactive({
    input$y
  })

  #gets the x variable name, will be used to change the plot legends
  xVarName<-reactive({
    input$x
  })

  #make the filteredData frame

  filteredData<-reactive({
    data<-isolate(theData())
    #if there is no input, make a dummy dataframe
    if(input$x=="x" && input$y=="y"){
      if(is.null(data)){
        data<-data.frame(x=0,y=0)
      }
    }else{
      data<-data[,c(input$x,input$y)]
      names(data)<-c("x","y")
    }
    data
  })

  #plot the ggvis plot in a reactive block so that it changes with filteredData
  vis<-reactive({
    plotData<-filteredData()
    plotData %>%
      ggvis(~x, ~y) %>%
      layer_points() %>%
      add_axis("y", title = yVarName()) %>%
      add_axis("x", title = xVarName()) %>%
      add_tooltip(function(df) format(sqrt(df$x),digits=2))
  })
  vis%>%bind_shiny("plot", "plot_ui")

  ##### add contingency table ########
  # display contingcy table output
  output$foo <- renderTable({
    if(is.null(data())){return ()}
    as.data.frame.matrix(table((data())))
  })

})