Question

我正在尝试在debian中安装biopython 1.65。我有依赖Numpy和Scipy。当我尝试构建它时，它失败了：

python setup.py build

running build running build_py running build_ext building 'Bio.cpairwise2' extension x86_64-linux-gnu-gcc -pthread -DNDEBUG -g -fwrapv -O2 -Wall -Wstrict-prototypes -fno-strict-aliasing -D_FORTIFY_SOURCE=2 -g -fstack-protector-strong -Wformat -Werror=format-security -fPIC -I/usr/include/python2.7 -c Bio/cpairwise2module.c -o build/temp.linux-x86_64-2.7/Bio/cpairwise2module.o Bio/cpairwise2module.c:12:20: fatal error: Python.h: No such file or directory #include "Python.h" ^ compilation terminated. error: command 'x86_64-linux-gnu-gcc' failed with exit status 1

有人知道我该如何解决它？

非常感谢

Answer 1

namespace WpfApplication55
{
    /// <summary>
    /// Interaction logic for MainWindow.xaml
    /// </summary>
    public partial class MainWindow : Window
    {
        TestCombo TC = new TestCombo();
        public MainWindow()
        {
            DataContext = TC;
            InitializeComponent();
        }

        private void Button_Click(object sender, RoutedEventArgs e)
        {
            TC.Begin(60);
        }

        private void Button_Click1(object sender, RoutedEventArgs e)
        {
            TC.Begin(120);
        }
    }

    public class TestCombo:INotifyPropertyChanged
    {
        private int someData;
        public int SomeData 
        {
            get { return someData; }
            set { someData = value; RaisePropertyChanged("SomeData"); }
        }

        public void StartCount(int input)
        {
            SomeData = input;
            while (input>0)
            {
                System.Threading.Thread.Sleep(1000);
                input -= 1;
                SomeData = input;
            }
        }

        public void Begin(int input)
        {   
            Action<int> Start = new Action<int>(StartCount);
            IAsyncResult result = Start.BeginInvoke(input, null, null);
        }

        public event PropertyChangedEventHandler PropertyChanged;

        private void RaisePropertyChanged (string info)
        {
            if (PropertyChanged != null)
                PropertyChanged(this, new PropertyChangedEventArgs(info));
        }
    }
}

告诉预处理器搜索本地文件，如果它不存在，则预处理器将其更改为

#include "Python.h"

应位于#include <Python.h>（作为参数传递给gcc）。许多Linux发行版默认没有安装头文件，因此您必须手动安装它。

/usr/include/python2.7的标头文件附带包python2.7

您可以通过libpython2.7-dev，aptitude或synaptic在包名后添加apt-cache search来查找要安装的软件包（在这种情况下dev ）;名称可能与安装的名称不同。

Answer 2

在Fedora上遇到同样的问题，有什么帮助：

yum install python-devel

编译biopython1.65时出错：error：command＆＃39; x86_64-linux-gnu-gcc＆＃39;退出状态1失败

2 个答案: