我将以下条件代码作为我脚本的一部分,并且仅在最后一次open
调用时遇到语法错误。建议?
if ($contig_string =~ /($pattern)/) {
print "$ERR_number \n";
print "Found forward pattern.\n";
print "Pattern found is: $1 \n";
$position = index($contig_string,$1);
print "Index returned: $position \n";
$substr_forward = substr($contig_string, $position, -2000);
print "$substr_forward \n";
open (REPORT, ">>", spacer_contigs) or die "Could not open";
print REPORT ">$ERR_number \n";
print REPORT "$substr_forward \n";
}
elsif ($contig_string =~ /($pattern_reverse)/) {
print "$ERR_number \n";
print "Found reverse pattern.\n";
print "Pattern found is: $1 \n";
$position_reverse = index($contig_string,$1);
print "Index returned: $position_reverse \n";
$substr_reverse = substr($contig_string, $position_reverse, 2000);
print "$substr_reverse \n";
open (REPORT, ">>", spacer_contigs) or die "Could not open";
print REPORT ">$ERR_number \n" or die "Could not append";
print REPORT "$substr_reverse \n";
}
elsif ($contig_string !~ /$pattern_forward/) {
print "$ERR_number \n";
print "Did not find pattern. \n"
open (NOMATCH, ">>", no_match) or die "Could not open"; # SYNTAX ERROR
print NOMATCH ">$ERR_number \n" or die "Could not append";
}
答案 0 :(得分:7)
您在导致问题的print
之前的open
上错过了分号。
此外,很少需要在换行前输出空格。你有很多字符串,如:
print "Did not find pattern. \n" # This is where the semicolon should be
最好写成:
print "Did not find pattern.\n";