我想在我的错误栏周围创建黑色轮廓,以便更好地看到白色错误栏(请参阅下面的附件代码)。
如果有人能帮助我,我将非常感激(如果有任何帮助,我可以将整个代码和输出发送给回复的人)。
可重复的例子
# DATA:
structure(list(damage = structure(c(1L, 1L, 1L, 1L, 1L, 1L, 1L,
1L, 1L, 1L, 1L, 1L, 1L, 1L, 1L, 2L, 2L, 2L, 2L, 2L, 2L, 2L, 2L,
2L, 2L, 2L, 2L, 2L, 2L, 2L, 3L, 3L, 3L, 3L, 3L, 3L, 3L, 3L, 3L,
3L, 3L, 3L, 3L, 3L, 3L), .Label = c("C", "L1", "L4"), class = "factor"),
leaf = structure(c(1L, 1L, 1L, 2L, 2L, 2L, 3L, 3L, 3L, 4L,
4L, 4L, 5L, 5L, 5L, 1L, 1L, 1L, 2L, 2L, 2L, 3L, 3L, 3L, 4L,
4L, 4L, 5L, 5L, 5L, 1L, 1L, 1L, 2L, 2L, 2L, 3L, 3L, 3L, 4L,
4L, 4L, 5L, 5L, 5L), .Label = c("Cot", "L1", "L2", "L3",
"L4"), class = "factor"), cor_average = c(587.6666667, 595.3333333,
858, 2361.666667, 2880, 2760, 2338.333333, 2006.666667, 3296.666667,
3660.333333, 2765, 3752, 3927.333333, 3705, 4636.666667,
742.5, 605, 520, 1974, 2408, 2494, 2102.333333, 2470, 2701,
3336.666667, 3737, 4529.666667, 4850, 4293.333333, 4972,
487.5, 645, 623.3333333, 1998.333333, 2016.666667, 1971.666667,
2520, 2532.333333, 2181.666667, 3720, 4275, 4389, 5625, 6303.333333,
4783.666667)), .Names = c("damage", "leaf", "cor_average"
), class = "data.frame", row.names = c(NA, -45L))
#CODE
data <- read.csv("Example.csv",sep=",",header=T)
library(ggplot2)
summarySE <- function(data=NULL, measurevar, groupvars=NULL, na.rm=FALSE,
conf.interval=.95, .drop=TRUE) {
library(plyr)
length2 <- function (x, na.rm=FALSE) {
if (na.rm) sum(!is.na(x))
else length(x)
}
datac <- ddply(data, groupvars, .drop=.drop,
.fun = function(xx, col) {
c(N = length2(xx[[col]], na.rm=na.rm),
mean = mean (xx[[col]], na.rm=na.rm),
sd = sd (xx[[col]], na.rm=na.rm)
)
},
measurevar
)
datac <- rename(datac, c("mean" = measurevar))
datac$se <- datac$sd / sqrt(datac$N)
ciMult <- qt(conf.interval/2 + .5, datac$N-1)
datac$ci <- datac$se * ciMult
return(datac)
}
CI <- summarySE(data, measurevar="cor_average",
groupvars=c("damage","leaf"))
CI
data$leaf <- ordered(data$leaf, levels = c("L4", "L3", "Cot","L1", "L2"))
pd <- position_dodge(0.4)
ggplot(CI, aes(x=leaf, y=cor_average, colour=damage)) +
geom_errorbar(aes(ymin=cor_average-ci, ymax=cor_average+ci),
width=.4, size=1.2,position=pd) +
geom_line(position=pd) +
scale_colour_manual(values=c("white","black","gray65"))+
geom_point(position=pd,size=4.4)+
labs(x="Leaf",y="Average nr. glands corrected for leaf sz.")+
theme(axis.text=element_text(size=13),
axis.title=element_text(size=16,face="bold"))+
theme(legend.text = element_text(size=14),
legend.title = element_text(size=14))