R:找不到函数" function(object,...)\ nobject"在glm()和bestglm()中

时间:2014-12-31 16:57:14

标签: r glm

我正在从bestglm包中运行bestglm分析:

res.bestglm <-
  bestglm(Xy = offermodel,
          family = binomial,
          IC = "BIC",
          method = "exhaustive")

summary(res.bestglm$BestModel) 
Morgan-Tatar search since family is non-gaussian.

我开始收到此错误:

Error in model.frame.default(formula = y ~ 1, weights = weights, drop.unused.levels = TRUE) : 
  could not find function "function (object, ...) \nobject"

我检查了我的模型数据并且它看起来很好 - 正确的类,没有遗漏,我以前用过的变量同样没有问题。

在对错误进行了无法进行故障排除和网络搜索后,我尝试了常规的glm数据并开始得到几乎相同的错误:

> glm.mba <- glm(y ~  female + DNC + SE_region + enr_before_offer + FA,
+                family = binomial(link = "probit"), data = offermodel)
Error in model.frame.default(formula = y ~ female + DNC + SE_region +  : 
  could not find function "function (object, ...) \nobject"

我不确定如何为此问题制作可重现的示例。这是我的数据结构:

> str(offermodel)
'data.frame':   2559 obs. of  10 variables:
 $ online_chan     : num  1 1 1 1 1 1 1 1 1 1 ...
 $ SE_region       : num  1 0 0 0 1 0 0 0 0 0 ...
 $ recruited       : num  0 0 0 0 0 0 0 0 0 0 ...
 $ referral        : num  0 0 0 0 0 0 0 0 0 0 ...
 $ FA              : num  1 1 0 0 1 1 1 1 1 1 ...
 $ female          : num  0 0 0 0 0 0 0 0 0 0 ...
 $ enr_before_offer: num  0 0 0 0 0 0 0 0 0 0 ...
 $ reg_lag_high    : num  0 0 0 0 0 0 0 0 0 0 ...
 $ DNC             : num  0 0 0 0 1 0 0 0 0 0 ...
 $ y               : num  1 1 1 0 0 1 1 1 1 1 ...

无论我的模型规范如何,如果我从数据框中删除列,这个问题仍然存在,所以我认为这不是数据问题。

> traceback()
5: model.frame.default(formula = y ~ female + DNC + SE_region + 
       enr_before_offer + FA, data = offermodel, drop.unused.levels = TRUE)
4: stats::model.frame(formula = y ~ female + DNC + SE_region + enr_before_offer + 
       FA, data = offermodel, drop.unused.levels = TRUE)
3: eval(expr, envir, enclos)
2: eval(mf, parent.frame())
1: glm(y ~ female + DNC + SE_region + enr_before_offer + FA, family = binomial(link = "probit"), 
       data = offermodel)

根据@BenBolker的建议,我尝试了一些调试选项并获得了更多信息:

> glm.mba <- glm(y ~  female + DNC + SE_region + enr_before_offer + FA, data = offermodel)
Error in model.frame.default(formula = y ~ female + DNC + SE_region +  : 
  could not find function "function (object, ...) \nobject"

Enter a frame number, or 0 to exit   

1: glm(y ~ female + DNC + SE_region + enr_before_offer + FA, data = offermodel)
2: eval(mf, parent.frame())
3: eval(expr, envir, enclos)
4: stats::model.frame(formula = y ~ female + DNC + SE_region + enr_before_offer + FA, data = offermodel, drop.unu
5: model.frame.default(formula = y ~ female + DNC + SE_region + enr_before_offer + FA, data = offermodel, drop.un

Selection: 5
Called from: (function () 
{
    if (.isMethodsDispatchOn()) {
        tState <- tracingState(FALSE)
        on.exit(tracingState(tState))
    }
    calls <- sys.calls()
    from <- 0L
    n <- length(calls)
    if (identical(sys.function(n), recover)) 
        n <- n - 1L
    for (i in rev(seq_len(n))) {
        calli <- calls[[i]]
        fname <- calli[[1L]]
        if (!is.na(match(deparse(fname)[1L], c("methods::.doTrace", 
            ".doTrace")))) {
            from <- i - 1L
            break
        }
    }
    if (from == 0L) 
        for (i in rev(seq_len(n))) {
            calli <- calls[[i]]
            fname <- calli[[1L]]
            if (!is.name(fname) || is.na(match(as.character(fname), 
                c("recover", "stop", "Stop")))) {
                from <- i
                break
            }
        }
    if (from > 0L) {
        if (!interactive()) {
            try(dump.frames())
            cat(gettext("recover called non-interactively; frames dumped, use debugger() to view\n"))
            return(NULL)
        }
        else if (identical(getOption("show.error.messages"), 
            FALSE)) 
            return(NULL)
        calls <- limitedLabels(calls[1L:from])
        repeat {
            which <- menu(calls, title = "\nEnter a frame number, or 0 to exit  ")
            if (which) 
                eval(substitute(browser(skipCalls = skip), list(skip = 7 - 
                  which)), envir = sys.frame(which))
            else break
        }
    }
    else cat(gettext("No suitable frames for recover()\n"))
})()

我也尝试过:

rm(res.bestglm) # Because of a message you can see in the comments
install.packages("bestglm")
require(bestglm)

1 个答案:

答案 0 :(得分:3)

非常感谢评论中的人们。

我不确定是什么导致了这个错误,但是这就是修复它的原因:

  1. 删除了有问题的对象res.bestglm
  2. 重新安装bestglm
  3. 保存图片并关闭项目
  4. 重新打开项目并加载包
  5. 我不确定为什么#1中的对象存在问题,但它在某种程度上混淆了全球环境。此外,在我没有首先移除对象并重新安装包之后启动了一个vanilla会话后,R找不到bestglm