在Linux中编译RInside示例失败

时间:2014-07-23 21:46:50

标签: c++ r rinside

我正在尝试将RInside与Ubuntu上的标准示例一起使用。安装完之后我刚才在RInside的源代码中使用了make命令。

有关我的操作系统的信息:gcc版本4.8.2(Ubuntu 4.8.2-19ubuntu1),GNU Make 3.81,R版本3.0.2(2013-09-25),RInside 0.2.11和Ubuntu 14.04。

这是编译错误。谁能帮我 ? :)

g++ -I/usr/share/R/include -I/usr/local/lib/R/site-library/Rcpp/include -I/usr/local/lib/R/site-library/RInside/include -O3 -pipe -g -Wall    rinside_module_sample0.cpp  -L/usr/lib/R/lib -lR  -lblas -llapack  -L/usr/local/lib/R/site-library/RInside/lib -lRInside -Wl,-rpath,/usr/local/lib/R/site-library/RInside/lib -o rinside_module_sample0
In file included from /usr/local/lib/R/site-library/Rcpp/include/Rcpp.h:64:0,
             from /usr/local/lib/R/site-library/RInside/include/RInsideCommon.h:38,
             from /usr/local/lib/R/site-library/RInside/include/RInside.h:26,
             from rinside_module_sample0.cpp:7:
rinside_module_sample0.cpp: In function ‘int main(int, char**)’:
/usr/local/lib/R/site-library/Rcpp/include/Rcpp/Module.h:451:5: error: ‘Shield’ was not declared in this scope
 Shield<SEXP> __load_module_call__( Rf_lang2( GET_MODULE_SYM, _rcpp_module_boot_##NAME() ); \
 ^
rinside_module_sample0.cpp:27:18: note: in expansion of macro ‘LOAD_RCPP_MODULE’
 R["bling"] = LOAD_RCPP_MODULE(bling) ;
              ^
/usr/local/lib/R/site-library/Rcpp/include/Rcpp/Module.h:451:5: note: suggested alternative:
 Shield<SEXP> __load_module_call__( Rf_lang2( GET_MODULE_SYM, _rcpp_module_boot_##NAME() ); \
 ^
rinside_module_sample0.cpp:27:18: note: in expansion of macro ‘LOAD_RCPP_MODULE’
 R["bling"] = LOAD_RCPP_MODULE(bling) ;
              ^
In file included from /usr/local/lib/R/site-library/Rcpp/include/Rcpp/protection/protection.h:21:0,
             from /usr/local/lib/R/site-library/Rcpp/include/RcppCommon.h:129,
             from /usr/local/lib/R/site-library/Rcpp/include/Rcpp.h:27,
             from /usr/local/lib/R/site-library/RInside/include/RInsideCommon.h:38,
             from /usr/local/lib/R/site-library/RInside/include/RInside.h:26,
             from rinside_module_sample0.cpp:7:
/usr/local/lib/R/site-library/Rcpp/include/Rcpp/protection/Shield.h:29:11: note:   ‘Rcpp::Shield’
 class Shield{
       ^
In file included from /usr/local/lib/R/site-library/Rcpp/include/Rcpp.h:64:0,
             from /usr/local/lib/R/site-library/RInside/include/RInsideCommon.h:38,
             from /usr/local/lib/R/site-library/RInside/include/RInside.h:26,
             from rinside_module_sample0.cpp:7:
/usr/local/lib/R/site-library/Rcpp/include/Rcpp/Module.h:451:16: error: expected primary-expression before ‘>’ token
 Shield<SEXP> __load_module_call__( Rf_lang2( GET_MODULE_SYM, _rcpp_module_boot_##NAME() ); \
            ^
rinside_module_sample0.cpp:27:18: note: in expansion of macro ‘LOAD_RCPP_MODULE’
 R["bling"] = LOAD_RCPP_MODULE(bling) ;
              ^
/usr/local/lib/R/site-library/Rcpp/include/Rcpp/Module.h:451:94: error: expected ‘)’ before ‘;’ token
 Shield<SEXP> __load_module_call__( Rf_lang2( GET_MODULE_SYM, _rcpp_module_boot_##NAME() ); \
                                                                                          ^
rinside_module_sample0.cpp:27:18: note: in expansion of macro ‘LOAD_RCPP_MODULE’
 R["bling"] = LOAD_RCPP_MODULE(bling) ;
              ^
/usr/local/lib/R/site-library/Rcpp/include/Rcpp/Module.h:452:13: error: ‘__load_module_call__’ was not declared in this scope
 Rf_eval(__load_module_call__), R_GlobalEnv );
         ^
rinside_module_sample0.cpp:27:18: note: in expansion of macro ‘LOAD_RCPP_MODULE’
 R["bling"] = LOAD_RCPP_MODULE(bling) ;
              ^
/usr/local/lib/R/site-library/Rcpp/include/Rcpp/Module.h:452:48: error: expected ‘;’ before ‘)’ token
 Rf_eval(__load_module_call__), R_GlobalEnv );
                                            ^
rinside_module_sample0.cpp:27:18: note: in expansion of macro ‘LOAD_RCPP_MODULE’
 R["bling"] = LOAD_RCPP_MODULE(bling) ;
              ^
make: *** [rinside_module_sample0] Error 1

1 个答案:

答案 0 :(得分:2)

您的问题没有显示您启动编辑的如何。 RInside依赖于R和Rcpp,因此使用中等复杂的Makefile。但如果你只是事情应该有效。在我的Ubuntu 14.04系统上,并使用git repo中的代码来安装RInside,它与你从CRAN获得的软件包一起安装:

edd@max:~$ cd git/rinside/inst/examples/standard/
edd@max:~/git/rinside/inst/examples/standard$ make rinside_sample0
g++-4.8 -I/usr/share/R/include -I/usr/local/lib/R/site-library/Rcpp/include \
 -I/usr/local/lib/R/site-library/RInside/include -g -O2 -fstack-protector \
 --param=ssp-buffer-size=4 -Wformat -Werror=format-security -D_FORTIFY_SOURCE=2 \
 -g -O3 -Wall -pipe -Wno-unused -pedantic -Wall   \
  rinside_sample0.cpp  -Wl,--export-dynamic -fopenmp  -L/usr/lib/R/lib \
  -lR -lpcre -llzma -lbz2 -lz -lrt -ldl -lm  -lblas -llapack  \
  -L/usr/local/lib/R/site-library/RInside/lib \
  -lRInside -Wl,-rpath,/usr/local/lib/R/site-library/RInside/lib \
   -o rinside_sample0
edd@max:~/git/rinside/inst/examples/standard$ ./rinside_sample0 
Hello, world!
edd@max:~/git/rinside/inst/examples/standard$ 

这是非常冗长,因为我更改了R的Debian / Ubuntu包以反映许多 默认的加固标志,以及我们需要的标题和库。

但主要的是:只需在examples目录中说make,一切都应该构建。