我正在寻找一种方法来使用thrust::counting_iterator
函数来并行化以下for循环:
for (int stride = 0 ; stride < N * M ; stride+=M) // N iterations
{
// Body of the loop
}
以下是代码的外观:
struct functor ()
{
__host__ __device__ void operator() (const int i)
{
// Body of the loop
}
}
thrust::counting_iterator<int> it1(0);
thrust::counting_iterator<int> it2 = it1 + N * M;
thrust::for_each (it1 , it2 , functor());
我知道counting_iterator
将迭代器增加1,那么有没有办法增加M?
答案 0 :(得分:1)
这是arbitrary transformation example和strided range example的组合。
下面,我正在考虑转换的例子
D[i] = A[i] + B[i] * C[i]
以下是代码:
#include <thrust/for_each.h>
#include <thrust/host_vector.h>
#include <thrust/device_vector.h>
#include <thrust/iterator/zip_iterator.h>
#include <iostream>
#include <thrust/iterator/counting_iterator.h>
#include <thrust/iterator/transform_iterator.h>
#include <thrust/iterator/permutation_iterator.h>
#include <thrust/functional.h>
#include <thrust/fill.h>
// for printing
#include <thrust/copy.h>
#include <ostream>
#define STRIDE 2
template <typename Iterator>
class strided_range
{
public:
typedef typename thrust::iterator_difference<Iterator>::type difference_type;
struct stride_functor : public thrust::unary_function<difference_type,difference_type>
{
difference_type stride;
stride_functor(difference_type stride)
: stride(stride) {}
__host__ __device__
difference_type operator()(const difference_type& i) const
{
return stride * i;
}
};
typedef typename thrust::counting_iterator<difference_type> CountingIterator;
typedef typename thrust::transform_iterator<stride_functor, CountingIterator> TransformIterator;
typedef typename thrust::permutation_iterator<Iterator,TransformIterator> PermutationIterator;
// type of the strided_range iterator
typedef PermutationIterator iterator;
// construct strided_range for the range [first,last)
strided_range(Iterator first, Iterator last, difference_type stride)
: first(first), last(last), stride(stride) {}
iterator begin(void) const
{
return PermutationIterator(first, TransformIterator(CountingIterator(0), stride_functor(stride)));
}
iterator end(void) const
{
return begin() + ((last - first) + (stride - 1)) / stride;
}
protected:
Iterator first;
Iterator last;
difference_type stride;
};
struct arbitrary_functor
{
template <typename Tuple>
__host__ __device__
void operator()(Tuple t)
{
// D[i] = A[i] + B[i] * C[i];
thrust::get<3>(t) = thrust::get<0>(t) + thrust::get<1>(t) * thrust::get<2>(t);
}
};
int main(void)
{
// allocate storage
thrust::device_vector<float> A(5);
thrust::device_vector<float> B(5);
thrust::device_vector<float> C(5);
thrust::device_vector<float> D(5);
// initialize input vectors
A[0] = 3; B[0] = 6; C[0] = 2;
A[1] = 4; B[1] = 7; C[1] = 5;
A[2] = 0; B[2] = 2; C[2] = 7;
A[3] = 8; B[3] = 1; C[3] = 4;
A[4] = 2; B[4] = 8; C[4] = 3;
typedef thrust::device_vector<float>::iterator Iterator;
strided_range<Iterator> posA(A.begin(), A.end(), STRIDE);
strided_range<Iterator> posB(B.begin(), B.end(), STRIDE);
strided_range<Iterator> posC(C.begin(), C.end(), STRIDE);
strided_range<Iterator> posD(D.begin(), D.end(), STRIDE);
// apply the transformation
thrust::for_each(thrust::make_zip_iterator(thrust::make_tuple(posA.begin(), posB.begin(), posC.begin(), posD.begin())),
thrust::make_zip_iterator(thrust::make_tuple(posA.end(), posB.end(), posC.end(), posD.end())),
arbitrary_functor());
// print the output
for(int i = 0; i < 5; i++)
std::cout << A[i] << " + " << B[i] << " * " << C[i] << " = " << D[i] << std::endl;
}
答案 1 :(得分:1)
为什么不在你的仿函数中将i
变量乘以M
?
如果在编译时知道M
,则可能是:
struct functor
{
__host__ __device__ void operator() (const int my_i)
{
int i = my_i *M;
// Body of the loop
}
};
thrust::counting_iterator<int> it1(0);
thrust::counting_iterator<int> it2 = it1 + N;
thrust::for_each (it1 , it2 , functor());
如果仅在运行时知道M
,我们可以将其作为初始化参数传递给仿函数:
struct functor
{
int my_M;
functor(int _M) : my_M(_M) ();
__host__ __device__ void operator() (const int my_i)
{
int i = my_i *my_M;
// Body of the loop
}
};
thrust::counting_iterator<int> it1(0);
thrust::counting_iterator<int> it2 = it1 + N;
thrust::for_each (it1 , it2 , functor(M));
你也可以将一个计数迭代器包装在一个转换迭代器中,它取得计数迭代器并将它乘以M:
struct functor
{
__host__ __device__ void operator() (const int i)
{
// Body of the loop
}
};
using namespace thrust::placeholders;
thrust::counting_iterator<int> it1(0);
thrust::counting_iterator<int> it2 = it1 + N;
thrust::for_each (make_transform_iterator(it1, _1 * M) , thrust::make_transform_iterator(it2, _1 * M) , functor());
这最后一个例子使用thrust placeholder expressions,虽然它可以通过一个额外的平凡函子来实现,它返回其参数乘以其参数。
这是一个完整的示例,显示了所有3种方法:
$ cat t492.cu
#include <stdio.h>
#include <thrust/transform.h>
#include <thrust/for_each.h>
#include <thrust/execution_policy.h>
#include <thrust/iterator/counting_iterator.h>
#include <thrust/iterator/transform_iterator.h>
#include <thrust/host_vector.h>
#include <thrust/functional.h>
#define N 5
#define M 4
using namespace thrust::placeholders;
struct my_functor_1
{
__host__ __device__ void operator() (const int i)
{
printf("functor 1 value: %d\n", i);
}
};
struct my_functor_2
{
__host__ __device__ void operator() (const int my_i)
{
int i = my_i*M;
printf("functor 2 value: %d\n", i);
}
};
struct my_functor_3
{
int my_M;
my_functor_3(int _M) : my_M(_M) {};
__host__ __device__ void operator() (const int my_i)
{
int i = my_i *my_M;
printf("functor 3 value: %d\n", i);
}
};
int main(){
thrust::counting_iterator<int> it1(0);
thrust::counting_iterator<int> it2 = it1 + N;
thrust::for_each(thrust::host, it1, it2, my_functor_1());
thrust::for_each(thrust::host, it1, it2, my_functor_2());
thrust::for_each(thrust::host, it1, it2, my_functor_3(M));
thrust::for_each(thrust::host, thrust::make_transform_iterator(it1, _1 * M), thrust::make_transform_iterator(it2, _1 * M), my_functor_1());
return 0;
}
$ nvcc -arch=sm_20 -o t492 t492.cu
$ ./t492
functor 1 value: 0
functor 1 value: 1
functor 1 value: 2
functor 1 value: 3
functor 1 value: 4
functor 2 value: 0
functor 2 value: 4
functor 2 value: 8
functor 2 value: 12
functor 2 value: 16
functor 3 value: 0
functor 3 value: 4
functor 3 value: 8
functor 3 value: 12
functor 3 value: 16
functor 1 value: 0
functor 1 value: 4
functor 1 value: 8
functor 1 value: 12
functor 1 value: 16
$