无法在ubuntu 12.04上安装闪亮的依赖项来托管闪亮服务器上的应用程序。

时间:2014-04-13 19:56:36

标签: r ubuntu-12.04 shiny-server

当我转到我的应用程序地址以获取简单的直方图应用程序时,我收到以下错误:

  

发生错误

     

应用程序无法启动。

     

应用程序在初始化期间退出。

     

eval中的错误(expr,envir,enclos):找不到Shiny包   在图书馆。确保已安装Shiny并且可以使用   您正在运行此应用程序的用户的库。电话:当地    - > eval.parent - > eval - > eval - > eval - > eval执行暂停

所以我尝试重新安装闪亮的包,我收到这条消息,我无法解释下一步行动。也许我需要明确关于安装依赖项?

xxxxxxxxxxxx:~$ sudo su - \
>   -c "R -e \"install.packages('shiny', repos='http://cran.rstudio.com/')\""

R version 3.1.0 RC (2014-04-05 r65382) -- "Spring Dance"
Copyright (C) 2014 The R Foundation for Statistical Computing
Platform: x86_64-pc-linux-gnu (64-bit)

R is free software and comes with ABSOLUTELY NO WARRANTY.
You are welcome to redistribute it under certain conditions.
Type 'license()' or 'licence()' for distribution details.

  Natural language support but running in an English locale

R is a collaborative project with many contributors.
Type 'contributors()' for more information and
'citation()' on how to cite R or R packages in publications.

Type 'demo()' for some demos, 'help()' for on-line help, or
'help.start()' for an HTML browser interface to help.
Type 'q()' to quit R.

> install.packages('shiny', repos='http://cran.rstudio.com/')
Installing package into ‘/usr/local/lib/R/site-library’
(as ‘lib’ is unspecified)
also installing the dependencies ‘Rcpp’, ‘httpuv’

trying URL 'http://cran.rstudio.com/src/contrib/Rcpp_0.11.1.tar.gz'
Content type 'application/x-gzip' length 2003515 bytes (1.9 Mb)
opened URL
==================================================
downloaded 1.9 Mb

trying URL 'http://cran.rstudio.com/src/contrib/httpuv_1.3.0.tar.gz'
Content type 'application/x-gzip' length 423739 bytes (413 Kb)
opened URL
==================================================
downloaded 413 Kb

trying URL 'http://cran.rstudio.com/src/contrib/shiny_0.9.1.tar.gz'
Content type 'application/x-gzip' length 958658 bytes (936 Kb)
opened URL
==================================================
downloaded 936 Kb

* installing *source* package ‘Rcpp’ ...
** package ‘Rcpp’ successfully unpacked and MD5 sums checked
** libs
g++ -I/usr/share/R/include -DNDEBUG -I../inst/include/     -fpic  -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Wformat-security -Werror=format-security -g  -c Date.cpp -o Date.o
g++ -I/usr/share/R/include -DNDEBUG -I../inst/include/     -fpic  -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Wformat-security -Werror=format-security -g  -c Module.cpp -o Module.o
g++ -I/usr/share/R/include -DNDEBUG -I../inst/include/     -fpic  -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Wformat-security -Werror=format-security -g  -c Rcpp_init.cpp -o Rcpp_init.o
g++ -I/usr/share/R/include -DNDEBUG -I../inst/include/     -fpic  -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Wformat-security -Werror=format-security -g  -c api.cpp -o api.o
g++ -I/usr/share/R/include -DNDEBUG -I../inst/include/     -fpic  -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Wformat-security -Werror=format-security -g  -c attributes.cpp -o attributes.o
g++ -I/usr/share/R/include -DNDEBUG -I../inst/include/     -fpic  -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Wformat-security -Werror=format-security -g  -c barrier.cpp -o barrier.o
g++ -shared -Wl,-Bsymbolic-functions -Wl,-z,relro -o Rcpp.so Date.o Module.o Rcpp_init.o api.o attributes.o barrier.o -L/usr/lib/R/lib -lR
installing to /usr/local/lib/R/site-library/Rcpp/libs
** R
** inst
** preparing package for lazy loading
Error : package ‘codetools’ was built before R 3.0.0: please re-install it
Error : unable to load R code in package ‘Rcpp’
ERROR: lazy loading failed for package ‘Rcpp’
* removing ‘/usr/local/lib/R/site-library/Rcpp’
ERROR: dependency ‘Rcpp’ is not available for package ‘httpuv’
* removing ‘/usr/local/lib/R/site-library/httpuv’
ERROR: dependency ‘httpuv’ is not available for package ‘shiny’
* removing ‘/usr/local/lib/R/site-library/shiny’

The downloaded source packages are in
    ‘/tmp/RtmpRLRUsk/downloaded_packages’
Warning messages:
1: In install.packages("shiny", repos = "http://cran.rstudio.com/") :
  installation of package ‘Rcpp’ had non-zero exit status
2: In install.packages("shiny", repos = "http://cran.rstudio.com/") :
  installation of package ‘httpuv’ had non-zero exit status
3: In install.packages("shiny", repos = "http://cran.rstudio.com/") :
  installation of package ‘shiny’ had non-zero exit status

1 个答案:

答案 0 :(得分:4)

根据jdharrison的建议安装codetools包之后,我重新安装了闪亮的,然后说我需要重新安装RJSONIO。然后我安装了RJSONIO并尝试再次安装闪亮。现在它要求我提供包caTools。当我安装caTools时,它要求使用bittops。然后我再次尝试安装caTools,它需要包摘要。我安装它,再次尝试闪亮,它要求xtable。我安装xtable和现在闪亮的安装!现在闪亮的服务器正在运行。