问题

Question

当尝试安装某些（或所有？）R软件包时，我总是遇到以下类型的错误，这在我看来并非特定于某个特定软件包，而是特定于对于 R环境。

> install.packages("plspm")
Installing package into ‘/home/ruser/R/x86_64-pc-linux-gnu-library/3.0’
(as ‘lib’ is unspecified)
also installing the dependencies ‘shape’, ‘amap’, ‘diagram’, ‘tester’, ‘turner’

trying URL 'http://cran.rstudio.com/src/contrib/shape_1.4.1.tar.gz'
Content type 'application/x-gzip' length 683458 bytes (667 Kb)
opened URL
==================================================
downloaded 667 Kb

trying URL 'http://cran.rstudio.com/src/contrib/amap_0.8-12.tar.gz'
Content type 'application/x-gzip' length 257611 bytes (251 Kb)
opened URL
==================================================
downloaded 251 Kb

trying URL 'http://cran.rstudio.com/src/contrib/diagram_1.6.2.tar.gz'
Content type 'application/x-gzip' length 466608 bytes (455 Kb)
opened URL
==================================================
downloaded 455 Kb

trying URL 'http://cran.rstudio.com/src/contrib/tester_0.1.7.tar.gz'
Content type 'application/x-gzip' length 112000 bytes (109 Kb)
opened URL
==================================================
downloaded 109 Kb

trying URL 'http://cran.rstudio.com/src/contrib/turner_0.1.7.tar.gz'
Content type 'application/x-gzip' length 106530 bytes (104 Kb)
opened URL
==================================================
downloaded 104 Kb

trying URL 'http://cran.rstudio.com/src/contrib/plspm_0.4.1.tar.gz'
Content type 'application/x-gzip' length 367040 bytes (358 Kb)
opened URL
==================================================
downloaded 358 Kb


The downloaded source packages are in
    ‘/tmp/RtmpJsgPbd/downloaded_packages’

> library(plspm)
Error in library(plspm) : there is no package called ‘plspm’

这是我的R环境信息：

> sessionInfo()
R version 3.0.3 (2014-03-06)
Platform: x86_64-pc-linux-gnu (64-bit)

locale:
 [1] LC_CTYPE=en_US.UTF-8 LC_NUMERIC=C         LC_TIME=C           
 [4] LC_COLLATE=C         LC_MONETARY=C        LC_MESSAGES=C       
 [7] LC_PAPER=C           LC_NAME=C            LC_ADDRESS=C        
[10] LC_TELEPHONE=C       LC_MEASUREMENT=C     LC_IDENTIFICATION=C 

attached base packages:
[1] stats     graphics  grDevices utils     datasets  methods   base     

other attached packages:
[1] RCurl_1.95-4.1 bitops_1.0-6  

loaded via a namespace (and not attached):
[1] tools_3.0.3

在RStudio中，我还尝试在dependencies=TRUE中指定install.packages()并指定type="source"（无论如何都是Linux上的默认值），但无济于事。

似乎我总是能够通过从命令行手动成功安装R包来解决这个问题（如ruser用户），这次也是如此：

R CMD INSTALL --build <'plspm' dependencies and their dependencies>
R CMD INSTALL --build plspm_0.4.1.tar.gz

> library(plspm)
Loading required package: amap
Loading required package: diagram
Loading required package: shape
Loading required package: tester
Loading required package: turner

> installed.packages()
           Package      LibPath
plspm      "plspm"      "/home/ruser/R/x86_64-pc-linux-gnu-library/3.0"

           Version      Priority
plspm      "0.4.1"      NA

           Depends
plspm      "R (>= 3.0.1), amap, diagram, tester, turner"

           NeedsCompilation Built
plspm      "no"             "3.0.3"

问题

为什么我能够通过手动安装其依赖项来成功安装plspm（以及其他软件包），然后在Ubuntu中从命令行启动的R会话中逐步安装它们。 ruser，但未能在RStudio Server中做同样的事情？

我很感激在R环境中理解和解决这个系统性问题的任何建议！

无法从RStudio Server中安装软件包

问题

0 个答案: