我有以下非常简单的代码:
import matplotlib.pyplot as plt
import numpy as np
import matplotlib.gridspec as gridspec
x = np.random.randn(60)
y = np.random.randn(60)
z = [np.random.random() for _ in range(60)]
fig = plt.figure()
gs = gridspec.GridSpec(1, 2)
ax0 = plt.subplot(gs[0, 0])
plt.scatter(x, y, s=20)
ax1 = plt.subplot(gs[0, 1])
cm = plt.cm.get_cmap('RdYlBu_r')
plt.scatter(x, y, s=20 ,c=z, cmap=cm, vmin=0, vmax=1)
cbaxes = fig.add_axes([0.6, 0.12, 0.1, 0.02])
plt.colorbar(cax=cbaxes, ticks=[0.,1], orientation='horizontal')
fig.tight_layout()
out_png = '/home/user/image_out.png'
plt.savefig(out_png, dpi=150)
plt.close()
如果我在我的机器上运行它,它会起作用,除了警告:
/usr/local/lib/python2.7/dist-packages/matplotlib/figure.py:1533: UserWarning: This figure includes Axes that are not compatible with tight_layout, so its results might be incorrect.
warnings.warn("This figure includes Axes that are not "
但是,如果我在群集上运行它,它会退出并出现以下错误:
/usr/lib/pymodules/python2.7/matplotlib/__init__.py:611: UserWarning: Could not find matplotlibrc; using defaults
warnings.warn('Could not find matplotlibrc; using defaults')
/usr/lib/pymodules/python2.7/matplotlib/__init__.py:698: UserWarning: could not find rc file; returning defaults
warnings.warn(message)
Traceback (most recent call last):
File "colorbar.py", line 7, in <module>
import matplotlib.pyplot as plt
File "/usr/lib/pymodules/python2.7/matplotlib/pyplot.py", line 23, in <module>
from matplotlib.figure import Figure, figaspect
File "/usr/lib/pymodules/python2.7/matplotlib/figure.py", line 18, in <module>
from axes import Axes, SubplotBase, subplot_class_factory
File "/usr/lib/pymodules/python2.7/matplotlib/axes.py", line 14, in <module>
import matplotlib.axis as maxis
File "/usr/lib/pymodules/python2.7/matplotlib/axis.py", line 10, in <module>
import matplotlib.font_manager as font_manager
File "/usr/lib/pymodules/python2.7/matplotlib/font_manager.py", line 1325, in <module>
_rebuild()
File "/usr/lib/pymodules/python2.7/matplotlib/font_manager.py", line 1275, in _rebuild
fontManager = FontManager()
File "/usr/lib/pymodules/python2.7/matplotlib/font_manager.py", line 962, in __init__
paths = [os.path.join(rcParams['datapath'], 'fonts', 'ttf'),
File "/usr/lib/python2.7/posixpath.py", line 77, in join
elif path == '' or path.endswith('/'):
AttributeError: 'NoneType' object has no attribute 'endswith'
发生了什么,我该如何解决?
答案 0 :(得分:5)
第一个警告与axes
和subplots
的创建方式有关。创建axes
指定大小,而subplots
将轴放在常规网格中。
所以tight_layout
无法调整axes
的大小,就像subplots
一样,您会收到警告。因此,在axes
subplots
,tight_layout
和fig.add_axes([0.6, 0.12, 0.1, 0.02])
可能需要进行大量调整
在群集上运行时遇到的错误在我看来与matplotlib安装的某些问题有关。警告就是这样:matplotlib在任何standard places中都找不到任何matplotlibrc
文件,因此它会回退到默认(硬编码)参数。然后它期望找到参数'datapath'
。但是不存在(或错误地定义为None
),因此rcParams['datapath']
返回None
。
然后将参数传递给os.path.join
,期望字符串,而不是NoneType
。
您可以查看是否getting a matplotlibrc
file并放入当前目录或~/.config/matplotlib
可以解决您的问题。
您应该做的另一件事是检查matplotlib的版本以及您运行的版本是否是您认为正在使用的版本
python -c 'import matplotlib; print(matplotlib.__version__); print(matplotlib.__file__)'
ps:我根本不认为你需要gs = gridspec.GridSpec(1, 2)
,除非你再用轴做一些额外的事情。
如果你这样做,你会得到完全相同的答案
fig = plt.figure(...)
ax0 = fig.add_subplot(121)
ax1 = fig.add_subplot(122)
或
fig, (ax0, ax1) = plt.subplots(nrows=1, ncols=2, ...)