我在列表中有一些数据需要查找连续的整数运行(我的大脑认为rle
但不知道如何在这里使用它。)
查看数据集并解释我之后的内容会更容易。
以下是数据视图:
$greg
[1] 7 8 9 10 11 20 21 22 23 24 30 31 32 33 49
$researcher
[1] 42 43 44 45 46 47 48
$sally
[1] 25 26 27 28 29 37 38 39 40 41
$sam
[1] 1 2 3 4 5 6 16 17 18 19 34 35 36
$teacher
[1] 12 13 14 15
期望的输出:
$greg
[1] 7:11, 20:24, 30:33, 49
$researcher
[1] 42:48
$sally
[1] 25:29, 37:41
$sam
[1] 1:6, 16:19 34:36
$teacher
[1] 12:15
使用基础包如何用最高和最低之间的冒号替换连续跨度以及非连续部分之间的逗号?请注意,数据从整数向量列表转到字符向量列表。
MWE数据:
z <- structure(list(greg = c(7L, 8L, 9L, 10L, 11L, 20L, 21L, 22L,
23L, 24L, 30L, 31L, 32L, 33L, 49L), researcher = 42:48, sally = c(25L,
26L, 27L, 28L, 29L, 37L, 38L, 39L, 40L, 41L), sam = c(1L, 2L,
3L, 4L, 5L, 6L, 16L, 17L, 18L, 19L, 34L, 35L, 36L), teacher = 12:15), .Names = c("greg",
"researcher", "sally", "sam", "teacher"))
答案 0 :(得分:11)
我认为diff
是解决方案。你可能需要一些额外的摆弄来处理单身人士,但是:
lapply(z, function(x) {
diffs <- c(1, diff(x))
start_indexes <- c(1, which(diffs > 1))
end_indexes <- c(start_indexes - 1, length(x))
coloned <- paste(x[start_indexes], x[end_indexes], sep=":")
paste0(coloned, collapse=", ")
})
$greg
[1] "7:11, 20:24, 30:33, 49:49"
$researcher
[1] "42:48"
$sally
[1] "25:29, 37:41"
$sam
[1] "1:6, 16:19, 34:36"
$teacher
[1] "12:15"
答案 1 :(得分:7)
使用IRanges
:
require(IRanges)
lapply(z, function(x) {
t <- as.data.frame(reduce(IRanges(x,x)))[,1:2]
apply(t, 1, function(x) paste(unique(x), collapse=":"))
})
# $greg
# [1] "7:11" "20:24" "30:33" "49"
#
# $researcher
# [1] "42:48"
#
# $sally
# [1] "25:29" "37:41"
#
# $sam
# [1] "1:6" "16:19" "34:36"
#
# $teacher
# [1] "12:15"
答案 2 :(得分:5)
以下尝试使用diff
和tapply
返回字符向量
runs <- lapply(z, function(x) {
z <- which(diff(x)!=1);
results <- x[sort(unique(c(1,length(x), z,z+1)))]
lr <- length(results)
collapse <- rep(seq_len(ceiling(lr/2)),each = 2, length.out = lr)
as.vector(tapply(results, collapse, paste, collapse = ':'))
})
runs
$greg
[1] "7:11" "20:24" "30:33" "49"
$researcher
[1] "42:48"
$sally
[1] "25:29" "37:41"
$sam
[1] "1:6" "16:19" "34:36"
$teacher
[1] "12:15"
答案 3 :(得分:4)
我有一个与Marius相似的解决方案,他的作品和我的作品但机制略有不同所以我想我也可以发布它:
findIntRuns <- function(run){
rundiff <- c(1, diff(run))
difflist <- split(run, cumsum(rundiff!=1))
unname(sapply(difflist, function(x){
if(length(x) == 1) as.character(x) else paste0(x[1], ":", x[length(x)])
}))
}
lapply(z, findIntRuns)
产生:
$greg
[1] "7:11" "20:24" "30:33" "49"
$researcher
[1] "42:48"
$sally
[1] "25:29" "37:41"
$sam
[1] "1:6" "16:19" "34:36"
$teacher
[1] "12:15"
答案 4 :(得分:4)
lapply
和tapply
的另一个简短解决方案:
lapply(z, function(x)
unname(tapply(x, c(0, cumsum(diff(x) != 1)), FUN = function(y)
paste(unique(range(y)), collapse = ":")
))
)
结果:
$greg
[1] "7:11" "20:24" "30:33" "49"
$researcher
[1] "42:48"
$sally
[1] "25:29" "37:41"
$sam
[1] "1:6" "16:19" "34:36"
$teacher
[1] "12:15"
答案 5 :(得分:2)
晚会,但这里有一个基于deparse
的单行:
lapply(z,function(x) paste(sapply(split(x,cumsum(c(1,diff(x)-1))),deparse),collapse=", "))
$greg
[1] "7:11, 20:24, 30:33, 49L"
$researcher
[1] "42:48"
$sally
[1] "25:29, 37:41"
$sam
[1] "1:6, 16:19, 34:36"
$teacher
[1] "12:15"