我在运行需要它们的脚本时遇到加载共享库的问题:
error while loading shared libraries: libirc.so: cannot open shared object file: No such file or directory
但是,我认为我的设置没问题:
set LD_LIBRARY_PATH = /lfs/data0/g_local/intel/composer_xe_2011_sp1.7.256/compiler/lib/intel64
export LD_LIBRARY_PATH
和ls /lfs/data0/g_local/intel/composer_xe_2011_sp1.7.256/compiler/lib/intel64
表明libirc.so
确实存在。
echo $LD_LIBRARY_PATH
正确返回:
/lfs/data0/g_local/intel/composer_xe_2011_sp1.7.256/compiler/lib/intel64
它仍然无效,所以我有点绝望...... :)
有人可以帮我吗?
一些有用的信息:
echo ${SHELL}
/bin/bash
另外,我运行的脚本在开头包含了这个:
#!/bin/csh
#PBS -z
#PBS -S /bin/csh
set PATH = /usr/local/x86_64/gnu/openmpi-1.4.5/bin
export PATH
谢谢!
答案 0 :(得分:0)
听起来你在群集上运行它,在这种情况下,问题与你的shell无关。试试:
#PBS -v LD_LIBRARY_PATH="/lfs/data0/g_local/intel/composer_xe_2011_sp1.7.256/compiler/lib/intel64"
值得注意的是
set LD_LIBRARY_PATH = /lfs/data0/g_local/intel/composer_xe_2011_sp1.7.256/compiler/lib/intel64
是csh语法,而你说你正在运行bash。 bash等价物是
LD_LIBRARY_PATH=/lfs/data0/g_local/intel/composer_xe_2011_sp1.7.256/compiler/lib/intel64
它的间距敏感。
答案 1 :(得分:0)
感谢nneonneo,这是它给出的内容:(我只是粘贴消息的开头,因为它很长,让我知道是否需要完整的输出):
LD_DEBUG=all ./mpp_starter
26489:
26489: file=librt.so.1 [0]; needed by ./mpp_starter [0]
26489: find library=librt.so.1 [0]; searching
26489: search path=/lfs/data0/gstar_local/intel/composer_xe_2011_sp1.7.256/compiler/lib/intel64/tls/x86_64:/lfs/data0/gstar_local/intel/composer_xe_2011_sp1.7.256/compiler/lib/intel64/tls:/lfs/data0/gstar_local/intel/composer_xe_2011_sp1.7.256/compiler/lib/intel64/x86_64:/lfs/data0/gstar_local/intel/composer_xe_2011_sp1.7.256/compiler/lib/intel64 (LD_LIBRARY_PATH)
26489: trying file=/lfs/data0/gstar_local/intel/composer_xe_2011_sp1.7.256/compiler/lib/intel64/tls/x86_64/librt.so.1
26489: trying file=/lfs/data0/gstar_local/intel/composer_xe_2011_sp1.7.256/compiler/lib/intel64/tls/librt.so.1
26489: trying file=/lfs/data0/gstar_local/intel/composer_xe_2011_sp1.7.256/compiler/lib/intel64/x86_64/librt.so.1
26489: trying file=/lfs/data0/gstar_local/intel/composer_xe_2011_sp1.7.256/compiler/lib/intel64/librt.so.1
26489: search cache=/etc/ld.so.cache
26489: trying file=/lib64/librt.so.1
26489:
26489: file=librt.so.1 [0]; generating link map
26489: dynamic: 0x0000003a74a06dc8 base: 0x0000000000000000 size: 0x0000000000207bb0
26489: entry: 0x0000003a74802140 phdr: 0x0000003a74800040 phnum: 9
26489:
26489:
26489: file=libnuma.so.1 [0]; needed by ./mpp_starter [0]
26489: find library=libnuma.so.1 [0]; searching
26489: search path=/lfs/data0/gstar_local/intel/composer_xe_2011_sp1.7.256/compiler/lib/intel64 (LD_LIBRARY_PATH)
26489: trying file=/lfs/data0/gstar_local/intel/composer_xe_2011_sp1.7.256/compiler/lib/intel64/libnuma.so.1
26489: search cache=/etc/ld.so.cache
26489: trying file=/usr/lib64/libnuma.so.1
26489:
26489: file=libnuma.so.1 [0]; generating link map
26489: dynamic: 0x0000003a77207450 base: 0x0000000000000000 size: 0x0000000000207d60
26489: entry: 0x0000003a770026d0 phdr: 0x0000003a77000040 phnum: 7
26489:
26489:
26489: file=libdl.so.2 [0]; needed by ./mpp_starter [0]
26489: find library=libdl.so.2 [0]; searching
26489: search path=/lfs/data0/gstar_local/intel/composer_xe_2011_sp1.7.256/compiler/lib/intel64 (LD_LIBRARY_PATH)
26489: trying file=/lfs/data0/gstar_local/intel/composer_xe_2011_sp1.7.256/compiler/lib/intel64/libdl.so.2
26489: search cache=/etc/ld.so.cache
26489: trying file=/lib64/libdl.so.2
26489:
26489: file=libdl.so.2 [0]; generating link map
26489: dynamic: 0x0000003a73a02da0 base: 0x0000000000000000 size: 0x0000000000203100
26489: entry: 0x0000003a73800de0 phdr: 0x0000003a73800040 phnum: 9
26489:
26489:
26489: file=libirc.so [0]; needed by ./mpp_starter [0]
26489: find library=libirc.so [0]; searching
26489: search path=/lfs/data0/gstar_local/intel/composer_xe_2011_sp1.7.256/compiler/lib/intel64 (LD_LIBRARY_PATH)
26489: trying file=/lfs/data0/gstar_local/intel/composer_xe_2011_sp1.7.256/compiler/lib/intel64/libirc.so
26489:
26489: file=libirc.so [0]; generating link map
26489: dynamic: 0x00007f6635da51b0 base: 0x00007f6635c66000 size: 0x0000000000142bc0
26489: entry: 0x00007f6635c6d040 phdr: 0x00007f6635c66040 phnum: 5
26489:
26489: