macos - rj包编译失败

非常感谢您一起来看看。这里有一篇上一篇文章，其中包含相同的错误消息“无法编译简单的JNI程序”，解决方案是更新到R 1.15。但我已经拥有最新版本的所有内容。虽然它显示“请参阅config.log以获取详细信息”，但它没有给出位置，并且终端上的“find / -name config.log”不返回任何内容。

这是一个令人筋疲力尽，令人沮丧的过程，试图让它发挥作用。任何帮助将不胜感激。

R版本2.15.1,64位（我使用Homebrew安装，但它应该不是问题）

Eclipse 4.2 Cocoa，64位（也试过3.7，也没用）

OSX 10.7.5

以下是错误消息：

install.packages(c("rj"), repos="http://download.walware.de/rj-1.1")
Installing package(s) into '/Library/Frameworks/R.framework/Versions/2.15/Resources/library'
(as 'lib' is unspecified)
trying URL 'http://download.walware.de/rj-1.1/src/contrib/rj_1.1.0-4.tar.gz'
Content type 'application/x-tar' length 314501 bytes (307 Kb)
opened URL
==================================================
downloaded 307 Kb

* installing *source* package 'rj' ...
checking R config... found
    R_HOME   : /usr/local/Cellar/r/2.15.1/R.framework/Resources
checking for gcc... cc
checking for C compiler default output file name... a.out
checking whether the C compiler works... yes
checking whether we are cross compiling... no
checking for suffix of executables... 
checking for suffix of object files... o
checking whether we are using the GNU C compiler... yes
checking whether cc accepts -g... yes
checking for cc option to accept ISO C89... none needed
checking Java support in R... ok
    JAVA_HOME: /System/Library/Java/JavaVirtualMachines/1.6.0.jdk/Contents/Home
    JAVA     : /usr/bin/java
    JAVAC    : /usr/bin/javac
    JAVAH    : /usr/bin/javah
    JAVA_CPPFLAGS: -I/System/Library/Java/JavaVirtualMachines/1.6.0.jdk/Contents/Home/include
    JAVA_LIBS: -framework JavaVM
    JAR      : /usr/bin/jar

configure: creating ./config.status
config.status: creating src/Makevars
=== configuring in jri (/private/var/folders/7p/q7qb1n2d277c9tqt65s5wy_c0000gn/T/RtmpVlP2YK/R.INSTALL2c9175fac4e/rj/jri)
configure: running /bin/sh ./configure --disable-option-checking '--prefix=/usr/local'  --cache-file=/dev/null --srcdir=.
checking build system type... i386-apple-darwin11.4.2
checking host system type... i386-apple-darwin11.4.2
checking for gcc... cc
checking for C compiler default output file name... a.out
checking whether the C compiler works... yes
checking whether we are cross compiling... no
checking for suffix of executables... 
checking for suffix of object files... o
checking whether we are using the GNU C compiler... yes
checking whether cc accepts -g... yes
checking for cc option to accept ISO C89... none needed
checking how to run the C preprocessor... cc -E
checking for grep that handles long lines and -e... /usr/bin/grep
checking for egrep... /usr/bin/grep -E
checking for ANSI C header files... rm: conftest.dSYM: is a directory
rm: conftest.dSYM: is a directory
yes
checking whether Java interpreter works... checking whether JNI programs can be compiled... configure: error: Cannot compile a simple JNI program. See config.log for details.
configure: error: ./configure failed for jri
ERROR: configuration failed for package 'rj'
* removing '/Library/Frameworks/R.framework/Versions/2.15/Resources/library/rj'
* restoring previous '/Library/Frameworks/R.framework/Versions/2.15/Resources/library/rj'

The downloaded source packages are in
    '/private/var/folders/7p/q7qb1n2d277c9tqt65s5wy_c0000gn/T/RtmpNM4Pyx/downloaded_packages'
Warning message:
In install.packages(c("rj"), repos = "http://download.walware.de/rj-1.1") :
  installation of package 'rj' had non-zero exit status

以下是会话信息。

sessionInfo()
R version 2.15.1 (2012-06-22)
Platform: x86_64-apple-darwin11.4.0 (64-bit)

locale:
[1] C

attached base packages:
[1] stats     graphics  grDevices utils     datasets  methods   base     

loaded via a namespace (and not attached):
[1] tcltk_2.15.1 tools_2.15.1

我遇到了同样的问题，以下解决方案对我有用。请按照步骤

1。）您需要在终端上运行此命令 - R CMD javareconf 2.）之后检查StatET与rJ包的兼容性，其顺序如下。

对于RJ 2.0（StatET 3.4 - 3.5）： install.packages（c（“rj”，“rj.gd”），repos =“http://download.walware.de/rj-2.0”）

对于RJ 1.1（StatET 3.0 - 3.3）： install.packages（c（“rj”，“rj.gd”），repos =“http://download.walware.de/rj-1.1”）

对于RJ 1.0（StatET 2.0）： install.packages（c（“rj”，“rj.gd”），repos =“http://download.walware.de/rj-1.0”）

对于RJ 0.5（StatET 0.10）： install.packages（“rj”，repos =“http://download.walware.de/rj-0.5”）

3.。）根据StatET了解兼容版本后，运行软件包安装命令。例如。我正在使用StatET 3.5因此对我而言RJ 2.0将起作用，而不是其他人。

所以命令就是 {install.packages（c（“rj”，“rj.gd”），repos =“http://download.walware.de/rj-2.0”）}

4.。）安装完成后，检查环境变量是否设置正确，以防您使用任何IDE（如Eclipse）。库路径应该在Eclipse或任何其他IDE中设置。

如有任何问题，请点击此链接 - http://www.walware.de/?page=/it/statet/installation.html

rj包编译失败

1 个答案: