远程R进程死亡

时间:2012-11-08 21:09:44

标签: r ssh parallel-processing

我在Ubuntu机器上运行R并试图利用远程Ubuntu机器进行并行处理。我可以ssh到远程机器。

hosts="remoteIPaddress"; cluster=makeCluster(hosts, type="PSOCK",user="myusername",master="mylocalIPaddress"); registerDoParallel(cluster); foreach(i=1:100,.combine="rbind") %dopar% i^2

makeCluster命令提示我输入密码,在远程计算机上,输入时可以看到R进程启动。这个过程立即死亡,当我运行foreach命令时,我得到“反序列化错误(节点$ con):从连接读取错误”。有谁知道发生了什么?

> sessionInfo()
R version 2.15.1 (2012-06-22)
Platform: x86_64-pc-linux-gnu (64-bit)

locale:
 [1] LC_CTYPE=en_US.UTF-8       LC_NUMERIC=C               LC_TIME=en_US.UTF-8        LC_COLLATE=en_US.UTF-8    
 [5] LC_MONETARY=en_US.UTF-8    LC_MESSAGES=en_US.UTF-8    LC_PAPER=C                 LC_NAME=C                 
 [9] LC_ADDRESS=C               LC_TELEPHONE=C             LC_MEASUREMENT=en_US.UTF-8 LC_IDENTIFICATION=C       

attached base packages:
[1] grDevices datasets  grid      parallel  utils     stats     graphics  methods   base     

other attached packages:
 [1] quantmod_0.3-17              TTR_0.21-1                   Defaults_1.1-1               portfolio_0.4-5             
 [5] nlme_3.1-104                 lattice_0.20-6               PerformanceAnalytics_1.0.4.4 xts_0.8-6                   
 [9] zoo_1.7-8                    np_0.40-13                   cubature_1.1-1               doParallel_1.0.1            
[13] iterators_1.0.6              foreach_1.4.0                boot_1.3-5                  

loaded via a namespace (and not attached):
[1] codetools_0.2-8 compiler_2.15.1 tools_2.15.1 

0 个答案:

没有答案