经过很长一段时间,我下载了一个我共同开发的程序,并尝试在我的Ubuntu Linux 12.04上重新编译它,但它似乎找不到math.h了。这可能是因为最近在gcc
中发生了一些变化,但我无法弄清楚src/Makefile.am
中是否存在错误或缺少依赖关系:
从http://www.ub.edu/softevol/variscan/下载:
tar xzf variscan-2.0.2.tar.gz
cd variscan-2.0.2/
make distclean
sh ./autogen.sh
make
我得到: [...]
gcc -DNDEBUG -O3 -W -Wall -ansi -pedantic -lm -o variscan variscan.o statistics.o common.o linefile.o memalloc.o dlist.o errabort.o dystring.o intExp.o kxTok.o pop.o window.o free.o output.o readphylip.o readaxt.o readmga.o readmaf.o readhapmap.o readxmfa.o readmav.o ran1.o swcolumn.o swnet.o swpoly.o swref.o
statistics.o: In function `calculate_Fu_and_Li_D':
statistics.c:(.text+0x497): undefined reference to `sqrt'
statistics.o: In function `calculate_Fu_and_Li_F':
statistics.c:(.text+0x569): undefined reference to `sqrt'
statistics.o: In function `calculate_Fu_and_Li_D_star':
statistics.c:(.text+0x63b): undefined reference to `sqrt'
statistics.o: In function `calculate_Fu_and_Li_F_star':
statistics.c:(.text+0x75c): undefined reference to `sqrt'
statistics.o: In function `calculate_Tajima_D':
statistics.c:(.text+0x85d): undefined reference to `sqrt'
statistics.o:statistics.c:(.text+0xcb1): more undefined references to `sqrt' follow
statistics.o: In function `calcRunMode21Stats':
statistics.c:(.text+0xe02): undefined reference to `log'
statistics.o: In function `correctedDivergence':
statistics.c:(.text+0xe5a): undefined reference to `log'
statistics.o: In function `calcRunMode22Stats':
statistics.c:(.text+0x104a): undefined reference to `sqrt'
statistics.o: In function `calculate_Fu_fs':
statistics.c:(.text+0x11a8): undefined reference to `fabsl'
statistics.c:(.text+0x11ca): undefined reference to `powl'
statistics.c:(.text+0x11f2): undefined reference to `logl'
statistics.o: In function `calculateStatistics':
statistics.c:(.text+0x13f2): undefined reference to `log'
collect2: ld returned 1 exit status
make[1]: *** [variscan] Error 1
make[1]: Leaving directory `/home/avilella/variscan/latest/variscan-2.0.2/src'
make: *** [all-recursive] Error 1
图书馆就在那里,因为这个简单的例子非常有效:
$ gcc test.c -o test -lm
$ cat test.c
#include <stdio.h>
#include <math.h>
int main(void)
{
double x = 0.5;
double result = sqrt(x);
printf("The hyperbolic cosine of %lf is %lf\n", x, result);
return 0;
}
有什么想法吗?
答案 0 :(得分:3)
库需要在编译器命令的末尾进行,就像在简单示例中一样:
gcc -DNDEBUG -O3 -W -Wall -ansi -pedantic -o variscan variscan.o statistics.o common.o linefile.o memalloc.o dlist.o errabort.o dystring.o intExp.o kxTok.o pop .o window.o free.o output.o readphylip.o readaxt.o readmga.o readmaf.o readhapmap.o readxmfa.o readmav.o ran1.o swcolumn.o swnet.o swpoly.o swref.o statistics.o -lm
-llibrary -l library Search the library named library when linking. (The second alternative with the library as a separate argument is only for POSIX compliance and is not recommended.) It makes a difference where in the command you write this option; the linker searches and processes libraries and object files in the order they are specified. Thus, `foo.o -lz bar.o' searches library `z' after file foo.o but before bar.o. If bar.o refers to functions in `z', those functions may not be loaded.
答案 1 :(得分:1)
Makefile.am
:
+variscan_LDADD = -lm
-variscan_LDFLAGS = -lm