计数pyspark数据框中的行数时出错

时间:2019-05-20 16:28:33

标签: pyspark pyspark-sql

我有一个pyspark.sql.dataframe.DataFrame,我只是想用df.count()来指望它。我不确定为什么它不起作用,因为我还没有对其进行任何转换并且执行show()效果很好。

我已经尝试过进行df.select('col_name').count(),但这也不起作用。

Py4JJavaError                             Traceback (most recent call last)
<ipython-input-6-159496d207bf> in <module>
----> 1 raw_0320_derived_df.select('_c0').count()
      2 # 197,045,644 maintained
      3 #

/usr/spark-2.4.0/python/pyspark/sql/dataframe.py in count(self)
    520         2
    521         """
--> 522         return int(self._jdf.count())
    523 
    524     @ignore_unicode_prefix

/usr/spark-2.4.0/python/lib/py4j-0.10.7-src.zip/py4j/java_gateway.py in __call__(self, *args)
   1255         answer = self.gateway_client.send_command(command)
   1256         return_value = get_return_value(
-> 1257             answer, self.gateway_client, self.target_id, self.name)
   1258 
   1259         for temp_arg in temp_args:

/usr/spark-2.4.0/python/pyspark/sql/utils.py in deco(*a, **kw)
     61     def deco(*a, **kw):
     62         try:
---> 63             return f(*a, **kw)
     64         except py4j.protocol.Py4JJavaError as e:
     65             s = e.java_exception.toString()

/usr/spark-2.4.0/python/lib/py4j-0.10.7-src.zip/py4j/protocol.py in get_return_value(answer, gateway_client, target_id, name)
    326                 raise Py4JJavaError(
    327                     "An error occurred while calling {0}{1}{2}.\n".
--> 328                     format(target_id, ".", name), value)
    329             else:
    330                 raise Py4JError(

Py4JJavaError: An error occurred while calling o97.count.
: org.apache.spark.SparkException: Job aborted due to stage failure: Task 90 in stage 5.0 failed 1 times, most recent failure: Lost task 90.0 in stage 5.0 (TID 403, localhost, executor driver): com.amazonaws.AmazonClientException: Unable to execute HTTP request: Timeout waiting for connection from pool
    at com.amazonaws.http.AmazonHttpClient.executeHelper(AmazonHttpClient.java:454)
    at com.amazonaws.http.AmazonHttpClient.execute(AmazonHttpClient.java:232)
    at com.amazonaws.services.s3.AmazonS3Client.invoke(AmazonS3Client.java:3528)
    at com.amazonaws.services.s3.AmazonS3Client.getObject(AmazonS3Client.java:1111)
    at org.apache.hadoop.fs.s3a.S3AInputStream.reopen(S3AInputStream.java:91)
    at org.apache.hadoop.fs.s3a.S3AInputStream.seek(S3AInputStream.java:115)
    at org.apache.hadoop.fs.FSDataInputStream.seek(FSDataInputStream.java:62)
    at org.apache.hadoop.io.compress.BZip2Codec.createInputStream(BZip2Codec.java:212)
    at org.apache.hadoop.mapreduce.lib.input.LineRecordReader.initialize(LineRecordReader.java:92)
    at org.apache.spark.sql.execution.datasources.HadoopFileLinesReader.<init>(HadoopFileLinesReader.scala:65)
    at org.apache.spark.sql.execution.datasources.HadoopFileLinesReader.<init>(HadoopFileLinesReader.scala:47)
    at org.apache.spark.sql.execution.datasources.csv.TextInputCSVDataSource$.readFile(CSVDataSource.scala:199)
    at org.apache.spark.sql.execution.datasources.csv.CSVFileFormat$$anonfun$buildReader$2.apply(CSVFileFormat.scala:142)
    at org.apache.spark.sql.execution.datasources.csv.CSVFileFormat$$anonfun$buildReader$2.apply(CSVFileFormat.scala:136)
    at org.apache.spark.sql.execution.datasources.FileFormat$$anon$1.apply(FileFormat.scala:148)
    at org.apache.spark.sql.execution.datasources.FileFormat$$anon$1.apply(FileFormat.scala:132)
    at org.apache.spark.sql.execution.datasources.FileScanRDD$$anon$1.org$apache$spark$sql$execution$datasources$FileScanRDD$$anon$$readCurrentFile(FileScanRDD.scala:124)
    at org.apache.spark.sql.execution.datasources.FileScanRDD$$anon$1.nextIterator(FileScanRDD.scala:177)
    at org.apache.spark.sql.execution.datasources.FileScanRDD$$anon$1.hasNext(FileScanRDD.scala:101)
    at org.apache.spark.sql.catalyst.expressions.GeneratedClass$GeneratedIteratorForCodegenStage1.agg_doAggregateWithoutKey_0$(Unknown Source)
    at org.apache.spark.sql.catalyst.expressions.GeneratedClass$GeneratedIteratorForCodegenStage1.processNext(Unknown Source)
    at org.apache.spark.sql.execution.BufferedRowIterator.hasNext(BufferedRowIterator.java:43)
    at org.apache.spark.sql.execution.WholeStageCodegenExec$$anonfun$11$$anon$1.hasNext(WholeStageCodegenExec.scala:619)
    at scala.collection.Iterator$$anon$11.hasNext(Iterator.scala:409)
    at org.apache.spark.shuffle.sort.BypassMergeSortShuffleWriter.write(BypassMergeSortShuffleWriter.java:125)
    at org.apache.spark.scheduler.ShuffleMapTask.runTask(ShuffleMapTask.scala:99)
    at org.apache.spark.scheduler.ShuffleMapTask.runTask(ShuffleMapTask.scala:55)
    at org.apache.spark.scheduler.Task.run(Task.scala:121)
    at org.apache.spark.executor.Executor$TaskRunner$$anonfun$10.apply(Executor.scala:402)
    at org.apache.spark.util.Utils$.tryWithSafeFinally(Utils.scala:1360)
    at org.apache.spark.executor.Executor$TaskRunner.run(Executor.scala:408)
    at java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1149)
    at java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:624)
    at java.lang.Thread.run(Thread.java:748)
Caused by: org.apache.http.conn.ConnectionPoolTimeoutException: Timeout waiting for connection from pool
    at org.apache.http.impl.conn.PoolingClientConnectionManager.leaseConnection(PoolingClientConnectionManager.java:232)
    at org.apache.http.impl.conn.PoolingClientConnectionManager$1.getConnection(PoolingClientConnectionManager.java:199)
    at sun.reflect.GeneratedMethodAccessor136.invoke(Unknown Source)
    at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43)
    at java.lang.reflect.Method.invoke(Method.java:498)
    at com.amazonaws.http.conn.ClientConnectionRequestFactory$Handler.invoke(ClientConnectionRequestFactory.java:70)
    at com.amazonaws.http.conn.$Proxy13.getConnection(Unknown Source)
    at org.apache.http.impl.client.DefaultRequestDirector.execute(DefaultRequestDirector.java:456)
    at org.apache.http.impl.client.AbstractHttpClient.execute(AbstractHttpClient.java:906)
    at org.apache.http.impl.client.AbstractHttpClient.execute(AbstractHttpClient.java:805)
    at com.amazonaws.http.AmazonHttpClient.executeHelper(AmazonHttpClient.java:384)
    ... 33 more

Driver stacktrace:
    at org.apache.spark.scheduler.DAGScheduler.org$apache$spark$scheduler$DAGScheduler$$failJobAndIndependentStages(DAGScheduler.scala:1887)
    at org.apache.spark.scheduler.DAGScheduler$$anonfun$abortStage$1.apply(DAGScheduler.scala:1875)
    at org.apache.spark.scheduler.DAGScheduler$$anonfun$abortStage$1.apply(DAGScheduler.scala:1874)
    at scala.collection.mutable.ResizableArray$class.foreach(ResizableArray.scala:59)
    at scala.collection.mutable.ArrayBuffer.foreach(ArrayBuffer.scala:48)
    at org.apache.spark.scheduler.DAGScheduler.abortStage(DAGScheduler.scala:1874)
    at org.apache.spark.scheduler.DAGScheduler$$anonfun$handleTaskSetFailed$1.apply(DAGScheduler.scala:926)
    at org.apache.spark.scheduler.DAGScheduler$$anonfun$handleTaskSetFailed$1.apply(DAGScheduler.scala:926)
    at scala.Option.foreach(Option.scala:257)
    at org.apache.spark.scheduler.DAGScheduler.handleTaskSetFailed(DAGScheduler.scala:926)
    at org.apache.spark.scheduler.DAGSchedulerEventProcessLoop.doOnReceive(DAGScheduler.scala:2108)
    at org.apache.spark.scheduler.DAGSchedulerEventProcessLoop.onReceive(DAGScheduler.scala:2057)
    at org.apache.spark.scheduler.DAGSchedulerEventProcessLoop.onReceive(DAGScheduler.scala:2046)
    at org.apache.spark.util.EventLoop$$anon$1.run(EventLoop.scala:49)
    at org.apache.spark.scheduler.DAGScheduler.runJob(DAGScheduler.scala:737)
    at org.apache.spark.SparkContext.runJob(SparkContext.scala:2061)
    at org.apache.spark.SparkContext.runJob(SparkContext.scala:2082)
    at org.apache.spark.SparkContext.runJob(SparkContext.scala:2101)
    at org.apache.spark.SparkContext.runJob(SparkContext.scala:2126)
    at org.apache.spark.rdd.RDD$$anonfun$collect$1.apply(RDD.scala:945)
    at org.apache.spark.rdd.RDDOperationScope$.withScope(RDDOperationScope.scala:151)
    at org.apache.spark.rdd.RDDOperationScope$.withScope(RDDOperationScope.scala:112)
    at org.apache.spark.rdd.RDD.withScope(RDD.scala:363)
    at org.apache.spark.rdd.RDD.collect(RDD.scala:944)
    at org.apache.spark.sql.execution.SparkPlan.executeCollect(SparkPlan.scala:299)
    at org.apache.spark.sql.Dataset$$anonfun$count$1.apply(Dataset.scala:2831)
    at org.apache.spark.sql.Dataset$$anonfun$count$1.apply(Dataset.scala:2830)
    at org.apache.spark.sql.Dataset$$anonfun$53.apply(Dataset.scala:3365)
    at org.apache.spark.sql.execution.SQLExecution$$anonfun$withNewExecutionId$1.apply(SQLExecution.scala:78)
    at org.apache.spark.sql.execution.SQLExecution$.withSQLConfPropagated(SQLExecution.scala:125)
    at org.apache.spark.sql.execution.SQLExecution$.withNewExecutionId(SQLExecution.scala:73)
    at org.apache.spark.sql.Dataset.withAction(Dataset.scala:3364)
    at org.apache.spark.sql.Dataset.count(Dataset.scala:2830)
    at sun.reflect.NativeMethodAccessorImpl.invoke0(Native Method)
    at sun.reflect.NativeMethodAccessorImpl.invoke(NativeMethodAccessorImpl.java:62)
    at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43)
    at java.lang.reflect.Method.invoke(Method.java:498)
    at py4j.reflection.MethodInvoker.invoke(MethodInvoker.java:244)
    at py4j.reflection.ReflectionEngine.invoke(ReflectionEngine.java:357)
    at py4j.Gateway.invoke(Gateway.java:282)
    at py4j.commands.AbstractCommand.invokeMethod(AbstractCommand.java:132)
    at py4j.commands.CallCommand.execute(CallCommand.java:79)
    at py4j.GatewayConnection.run(GatewayConnection.java:238)
    at java.lang.Thread.run(Thread.java:748)
Caused by: com.amazonaws.AmazonClientException: Unable to execute HTTP request: Timeout waiting for connection from pool
    at com.amazonaws.http.AmazonHttpClient.executeHelper(AmazonHttpClient.java:454)
    at com.amazonaws.http.AmazonHttpClient.execute(AmazonHttpClient.java:232)
    at com.amazonaws.services.s3.AmazonS3Client.invoke(AmazonS3Client.java:3528)
    at com.amazonaws.services.s3.AmazonS3Client.getObject(AmazonS3Client.java:1111)
    at org.apache.hadoop.fs.s3a.S3AInputStream.reopen(S3AInputStream.java:91)
    at org.apache.hadoop.fs.s3a.S3AInputStream.seek(S3AInputStream.java:115)
    at org.apache.hadoop.fs.FSDataInputStream.seek(FSDataInputStream.java:62)
    at org.apache.hadoop.io.compress.BZip2Codec.createInputStream(BZip2Codec.java:212)
    at org.apache.hadoop.mapreduce.lib.input.LineRecordReader.initialize(LineRecordReader.java:92)
    at org.apache.spark.sql.execution.datasources.HadoopFileLinesReader.<init>(HadoopFileLinesReader.scala:65)
    at org.apache.spark.sql.execution.datasources.HadoopFileLinesReader.<init>(HadoopFileLinesReader.scala:47)
    at org.apache.spark.sql.execution.datasources.csv.TextInputCSVDataSource$.readFile(CSVDataSource.scala:199)
    at org.apache.spark.sql.execution.datasources.csv.CSVFileFormat$$anonfun$buildReader$2.apply(CSVFileFormat.scala:142)
    at org.apache.spark.sql.execution.datasources.csv.CSVFileFormat$$anonfun$buildReader$2.apply(CSVFileFormat.scala:136)
    at org.apache.spark.sql.execution.datasources.FileFormat$$anon$1.apply(FileFormat.scala:148)
    at org.apache.spark.sql.execution.datasources.FileFormat$$anon$1.apply(FileFormat.scala:132)
    at org.apache.spark.sql.execution.datasources.FileScanRDD$$anon$1.org$apache$spark$sql$execution$datasources$FileScanRDD$$anon$$readCurrentFile(FileScanRDD.scala:124)
    at org.apache.spark.sql.execution.datasources.FileScanRDD$$anon$1.nextIterator(FileScanRDD.scala:177)
    at org.apache.spark.sql.execution.datasources.FileScanRDD$$anon$1.hasNext(FileScanRDD.scala:101)
    at org.apache.spark.sql.catalyst.expressions.GeneratedClass$GeneratedIteratorForCodegenStage1.agg_doAggregateWithoutKey_0$(Unknown Source)
    at org.apache.spark.sql.catalyst.expressions.GeneratedClass$GeneratedIteratorForCodegenStage1.processNext(Unknown Source)
    at org.apache.spark.sql.execution.BufferedRowIterator.hasNext(BufferedRowIterator.java:43)
    at org.apache.spark.sql.execution.WholeStageCodegenExec$$anonfun$11$$anon$1.hasNext(WholeStageCodegenExec.scala:619)
    at scala.collection.Iterator$$anon$11.hasNext(Iterator.scala:409)
    at org.apache.spark.shuffle.sort.BypassMergeSortShuffleWriter.write(BypassMergeSortShuffleWriter.java:125)
    at org.apache.spark.scheduler.ShuffleMapTask.runTask(ShuffleMapTask.scala:99)
    at org.apache.spark.scheduler.ShuffleMapTask.runTask(ShuffleMapTask.scala:55)
    at org.apache.spark.scheduler.Task.run(Task.scala:121)
    at org.apache.spark.executor.Executor$TaskRunner$$anonfun$10.apply(Executor.scala:402)
    at org.apache.spark.util.Utils$.tryWithSafeFinally(Utils.scala:1360)
    at org.apache.spark.executor.Executor$TaskRunner.run(Executor.scala:408)
    at java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1149)
    at java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:624)
    ... 1 more
Caused by: org.apache.http.conn.ConnectionPoolTimeoutException: Timeout waiting for connection from pool
    at org.apache.http.impl.conn.PoolingClientConnectionManager.leaseConnection(PoolingClientConnectionManager.java:232)
    at org.apache.http.impl.conn.PoolingClientConnectionManager$1.getConnection(PoolingClientConnectionManager.java:199)
    at sun.reflect.GeneratedMethodAccessor136.invoke(Unknown Source)
    at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43)
    at java.lang.reflect.Method.invoke(Method.java:498)
    at com.amazonaws.http.conn.ClientConnectionRequestFactory$Handler.invoke(ClientConnectionRequestFactory.java:70)
    at com.amazonaws.http.conn.$Proxy13.getConnection(Unknown Source)
    at org.apache.http.impl.client.DefaultRequestDirector.execute(DefaultRequestDirector.java:456)
    at org.apache.http.impl.client.AbstractHttpClient.execute(AbstractHttpClient.java:906)
    at org.apache.http.impl.client.AbstractHttpClient.execute(AbstractHttpClient.java:805)
    at com.amazonaws.http.AmazonHttpClient.executeHelper(AmazonHttpClient.java:384)
    ... 33 more

0 个答案:

没有答案