我正在尝试在Ubuntu 18.04上安装NrrdIO,以运行Marching Cubes来分割医学图像。这是我尝试运行它的链接。
http://web.cse.ohio-state.edu/research/graphics/isotable/
我正在尝试安装ijkmcube-v0-3-3.tar,它需要ITKNrrdIO.a库。我遇到了这个错误:
[ 7%] Linking CXX executable ijkmcube
/usr/bin/ld: cannot find -lNrrdIO
collect2: error: ld returned 1 exit status
CMakeFiles/ijkmcube.dir/build.make:406: recipe for target 'ijkmcube' failed
make[2]: *** [ijkmcube] Error 1
CMakeFiles/Makefile2:131: recipe for target 'CMakeFiles/ijkmcube.dir/all' failed
make[1]: *** [CMakeFiles/ijkmcube.dir/all] Error 2
Makefile:129: recipe for target 'all' failed
make: *** [all] Error 2
我已经安装了NrrdIO 1.11.0,并尝试使用NrrdIO 1.9.0,但是在运行时 使 我总是会遇到此错误,由于某种原因它找不到lNrrdIO。有人可以帮忙吗? 谢谢
编辑:
我认为链接存在问题,但是当我将NrrdIO.a文件复制到/ usr / bin并修改了符号链接以指向它时,出现如下错误:
[ 7%] Linking CXX executable ijkmcube
collect2: fatal error: cannot find 'ld'
compilation terminated.
CMakeFiles/ijkmcube.dir/build.make:406: recipe for target 'ijkmcube'
failed
make[2]: *** [ijkmcube] Error 1
CMakeFiles/Makefile2:131: recipe for target '
CMakeFiles/ijkmcube.dir/all' failed
make[1]: *** [CMakeFiles/ijkmcube.dir/all] Error 2
Makefile:129: recipe for target 'all' failed
make: *** [all] Error 2
有人可以帮忙吗?谢谢
编辑2
PROJECT(IJKMCUBE)
#---------------------------------------------------------
CMAKE_MINIMUM_REQUIRED(VERSION 2.8)
IF (NOT DEFINED ${IJK_DIR})
GET_FILENAME_COMPONENT(IJK_ABSOLUTE_PATH "../.." ABSOLUTE)
SET(IJK_DIR ${IJK_ABSOLUTE_PATH} CACHE PATH "IJK directory")
ENDIF (NOT DEFINED ${IJK_DIR})
SET(CMAKE_INSTALL_PREFIX "${IJK_DIR}/")
SET(LIBRARY_OUTPUT_PATH ${IJK_DIR}/lib CACHE PATH "Library directory")
SET(IJKMCUBE_DIR "src/ijkmcube")
SET(NRRD_LIBDIR "${IJK_DIR}/lib")
SET(IJK_ISOTABLE_DIR "${IJK_DIR}/isotable" CACHE PATH "Isotable
directory")
#---------------------------------------------------------
IF (NOT CMAKE_BUILD_TYPE)
SET (CMAKE_BUILD_TYPE Release CACHE STRING
"Default build type: Release" FORCE)
ENDIF (NOT CMAKE_BUILD_TYPE)
INCLUDE_DIRECTORIES("${IJK_DIR}/include")
LINK_DIRECTORIES("${NRRD_LIBDIR}")
LINK_LIBRARIES(expat NrrdIO z)
ADD_DEFINITIONS(-DIJK_ISOTABLE_DIR=\"${IJK_ISOTABLE_DIR}\")
ADD_EXECUTABLE(ijkmcube ijkmcube_main.cxx ijkmcubeIO.cxx ijkmcube.cxx
ijkmcube_datastruct.cxx ijkmcube_sub.cxx
ijkmcube_extract.cxx ijkmcube_util.cxx
ijksnapmc.cxx
ijktable.cxx ijktable_poly.cxx ijktable_ambig.cxx
ijkoctree.cxx ijkxitIO.cxx)
ADD_LIBRARY(ijkmcubeL STATIC EXCLUDE_FROM_ALL ijkmcubeIO.cxx
ijkmcube.cxx ijkmcube_datastruct.cxx ijkmcube_sub.cxx
ijkmcube_extract.cxx ijkmcube_util.cxx ijksnapmc.cxx
ijktable.cxx ijkoctree.cxx ijkxitIO.cxx)
SET_TARGET_PROPERTIES(ijkmcubeL PROPERTIES OUTPUT_NAME ijkmcube)
ADD_CUSTOM_TARGET(lib DEPENDS ijkmcubeL)
SET(CMAKE_INSTALL_PREFIX ${IJK_DIR})
INSTALL(TARGETS ijkmcube DESTINATION "bin/linux")
ADD_CUSTOM_TARGET(tar WORKING_DIRECTORY ../.. COMMAND tar cvfh
${IJKMCUBE_DIR}/ijkmcube.tar ${IJKMCUBE_DIR}/README
${IJKMCUBE_DIR}/INSTALL ${IJKMCUBE_DIR}/RELEASE_NOTES
${IJKMCUBE_DIR}/*.cxx ${IJKMCUBE_DIR}/*.h ${IJKMCUBE_DIR}/*.txx
${IJKMCUBE_DIR}/CMakeLists.txt ${IJKMCUBE_DIR}/man/*
${IJKMCUBE_DIR}/ijkmcube_doxygen.config)
ADD_CUSTOM_TARGET(doc COMMAND doxygen ijkmcube_doxygen.config)
已解决
Tsyvarev解决了该问题,必须将libNrrdIO.a文件复制到/ usr / lib /。请参阅评论以获取确切解决方案
答案 0 :(得分:0)
此答案由@Tsyvarev给出:
通过建立名为ld
的链接,您将删除原始链接器(ld)。没有链接器,您肯定无法构建任何库。您需要做一个名为lNrrdIO.a
的链接,这样它将指向实际的库位置:sudo ln -sfn /home/subham/Downloads/NrrdIO-1.9.0-src/lNrrdIO.a lNrrdIO.a
(从/usr/lib
目录运行此命令)。并还原原始/usr/bin/ld
文件。