阅读Pandas HDFStore时出错(使用PyTables)

时间:2015-10-30 19:06:44

标签: python pandas hdf5 pytables hdf

我有一个pandas HDFStore对象(pandas使用PyTables实现HDF5,如果相关的话)和mydata DataFrame(store["mydata"] = mydata)并且有一些代码可以定期将数据附加到{{1} } DataFrame。当我尝试访问该HDFStore时,我收到此错误。

mydata

这是我打印时商店的样子。

//anaconda/lib/python2.7/site-packages/tables/group.py:1213: UserWarning: problems loading leaf ``/mydata/table``::

  HDF5 error back trace

  File "H5Dio.c", line 173, in H5Dread
    can't read data
  File "H5Dio.c", line 551, in H5D__read
    can't read data
  File "H5Dchunk.c", line 1872, in H5D__chunk_read
    unable to read raw data chunk
  File "H5Dchunk.c", line 2902, in H5D__chunk_lock
    data pipeline read failed
  File "H5Z.c", line 1375, in H5Z_pipeline
    filter returned failure during read
  File "H5Zdeflate.c", line 125, in H5Z_filter_deflate
    inflate() failed

End of HDF5 error back trace

Problems reading the array data.

The leaf will become an ``UnImplemented`` node.
  % (self._g_join(childname), exc))

我不确定为什么会这样。

要处理数据,我从其他位置复制并粘贴了<class 'pandas.io.pytables.HDFStore'> File path: ../path/to/panda/store.h5 /mydata [invalid_HDFStore node: 'UnImplemented' object has no attribute 'description'] 文件(如果重要,则不调用.h5)。这可能是错误的来源,还是因为我用.close()附加数据?

0 个答案:

没有答案