Python中的标量字段可视化

时间:2014-11-17 10:33:10

标签: python 3d visualization mayavi

我需要在Python中可视化几个重叠的标量字段。我找到mayavi库来做这种情节。问题是我不明白如何为标量字段自定义颜色映射。我的想法是每个领域都有一种颜色的阴影。我试图采用an example,但它不起作用。这里有我的代码,使用红色阴影可视化标量字段:

import numpy as np
from mayavi import mlab

x, y, z = np.ogrid[-10:10:20j, -10:10:20j, -10:10:20j]
s = np.sin(x*y*z)/(x*y*z)

src = mlab.pipeline.scalar_field(s)
volume = mlab.pipeline.volume(src)

lut = np.zeros((256, 4), np.uint8)
lut[:,-1] = 255
lut[:, 0] = np.linspace(0, 255, 256)

volume.module_manager.scalar_lut_manager.lut.table = lut

mlab.draw()
mlab.view(40, 85)

mlab.show()

但是,输出图总是带有标准的蓝红色查找表。

1 个答案:

答案 0 :(得分:0)

我无法使用lut_manager找到解决方案,但是this github reply之后的解决方案适用于我。

import numpy as np
from mayavi import mlab
# import color transfer function from vtk
from tvtk.util import ctf
# import matlab colormaps
from matplotlib.pyplot import cm

x, y, z = np.ogrid[-10:10:20j, -10:10:20j, -10:10:20j]
s = np.sin(x*y*z)/(x*y*z)

src = mlab.pipeline.scalar_field(s)
volume = mlab.pipeline.volume(src)

# save the color transfer function of the current volume
c = ctf.save_ctfs(volume._volume_property)
# change the alpha channel as needed
c['alpha'][1][1] = 0.5
# change the color points to another color scheme
# in this case 'magma'
c['rgb']=[[a[0],a[1],a[2],cm.magma.colors.index(a)/255] for a in cm.magma.colors]
# load the new color transfer function
ctf.load_ctfs(c, volume._volume_property)
# signal for update
volume.update_ctf = True

mlab.show()