我是 R 的新手,所以这个问题非常基础,但我一直在努力解决这个问题,找不到有效的解决方案。我想从同一区域的一些地图中创建一个栅格砖。
它们以HDF-EOS
格式下载,我使用 Modis重投影工具将其转换为.tif
。
生成的栅格具有相同的投影,但其范围,分辨率和原点不同。
我尝试了几种方法,总结如下:
手动定义子集范围并对所有栅格进行子集化。然后尝试使用子集栅格制作砖块
重新采样栅格,为它们提供相同数量的列和行。理想情况下,这将确保栅格单元对齐并可放入栅格砖中。此选项创建了一个块,其中栅格没有值,它们是空的。
我想知道我应该遵循什么概念来纠正程度。创建一个空栅格是否正确(有效),我将在后面用导入的栅格图像的值填充它?你能看出我弄错了吗? 如果它是相关的,我正在使用 Mac OSX版本10.9.1 ,并使用 rgdal版本0.8-14
任何帮助将非常感谢!
三江源
我在这里添加了我一直在使用的代码:
# .tif files have been creating using the Modis Reprojection Tool. Input
# files used for this Tool was LANDSAT HDF-EOS imagery.
library(raster)
library(rgdal)
setwd()=getwd()
# Download the files from dropbox:
dl_from_dropbox <- function(x, key) {
require(RCurl)
bin <- getBinaryURL(paste0("https://dl.dropboxusercontent.com/s/", key, "/", x),
ssl.verifypeer = FALSE)
con <- file(x, open = "wb")
writeBin(bin, con)
close(con)
message(noquote(paste(x, "read into", getwd())))
}
dl_from_dropbox("lndsr.LT52210611985245CUB00-vi.NDVI.tif", "qb1bap9rghwivwy")
dl_from_dropbox("lndsr.LT52210611985309CUB00-vi.NDVI.tif", "sbhcffotirwnnc6")
dl_from_dropbox("lndsr.LT52210611987283CUB00-vi.NDVI.tif", "2zrkoo00ngigfzm")
# Create three rasters
tif1 <- "lndsr.LT52210611985245CUB00-vi.NDVI.tif"
tif2 <- "lndsr.LT52210611985309CUB00-vi.NDVI.tif"
tif3 <- "lndsr.LT52210611987283CUB00-vi.NDVI.tif"
r1 <- raster(tif1, values=TRUE)
r2 <- raster(tif2, band=1, values=TRUE)
r3 <- raster(tif3, band=1, values=TRUE)
### Display their properties
# projection is identical for the three rasters
projection(r1)
# "+proj=longlat +datum=WGS84 +no_defs +ellps=WGS84 +towgs84=0,0,0"
projection(r2)
projection(r3)
# Extents are different
extent(r1)
# class : Extent
# xmin : -45.85728
# xmax : -43.76855
# ymin : -2.388705
# ymax : -0.5181549
extent(r2)
# class : Extent
# xmin : -45.87077
# xmax : -43.78204
# ymin : -2.388727
# ymax : -0.5208711
extent(r3)
# class : Extent
# xmin : -45.81952
# xmax : -43.7173
# ymin : -2.405129
# ymax : -0.5154312
# origin differs for all
origin(r1)
# 5.644590e-05 -8.588605e-05
origin(r2)
# 0.0001122091 -0.0001045107
origin(r3)
# 6.949976e-05 -5.895945e-05
# resolution differs for r2
res(r1)
# 0.0002696872 0.0002696872
res(r2)
# 0.0002696875 0.0002696875
res(r3)
# 0.0002696872 0.0002696872
## Try different approaches to create a raster brick
# a- define a subset extent, and subset all the rasters
plot(r1, main="layer1 NDVI")
de <- drawExtent(show=TRUE, col="red")
de
# class : Extent
# xmin : -45.36159
# xmax : -45.30108
# ymin : -2.002435
# ymax : -1.949501
e <- extent(-45.36159,-45.30108,-2.002435,-1.949501)
# Crop each raster with this extent
r1c <- crop(r1,e)
r2c <- crop(r2,e)
r3c <- crop(r3,e)
# Make raster brick
rb_a <- brick(r1c,r2c,r3c)
# Error in compareRaster(x) : different extent
# b- Resample each raster
s <- raster(nrow=6926, ncol=7735) # smallest nrow and ncol among r1,r2 and r3
r1_res <- resample(r1,s, method="ngb")
r2_res <- resample(r2,s, method="ngb")
r3_res <- resample(r3,s, method="ngb")
# Resampling gives for the three rasters the following message:
# Warning message:
# In .local(x, y, ...) :
# you are resampling y a raster with a much larger cell size,
# perhaps you should use "aggregate" first
# Make raster brick
rb_c <- brick(r1, r2, r3)
# Error in compareRaster(x) : different extent
答案 0 :(得分:10)
这里有一些可以帮到你的东西。因为我没有你的.tif文件只是一些提示。你有没有检查光栅 s 的范围?这是世界的大小,只有那些列的细胞非常大。因此,您必须在重新采样之前为栅格添加一个范围。根据您的信息我做了类似的事情:
# create an extent that includes all your data
e<-extent(-46, -43, -2, -0.6)
# create a raster with that extent, and the number of rows and colums to achive a
# similar resolution as you had before, you might have to do some math here....
# as crs, use the same crs as in your rasters before, from the crs slot
s<-raster(e, nrows=7000, ncols=7800, crs=r1@crs)
# use this raster to reproject your original raster (since your using the same crs,
# resample should work fine
r1<-resample(r1, s, method="ngb")
节日快乐, 本
PS是找到所需范围的更好方法&amp;分辨率:
# dummy extent from your rasters, instead use lapply(raster list, extent)
a<-extent(-45.85728, -43.76855, -2.388705, -0.5181549)
b<-extent(-45.87077, -43.78204, -2.388727, -0.5208711)
c<-extent(-45.81952 ,-43.7173 , -2.405129 ,-0.5154312)
extent_list<-list(a, b, c)
# make a matrix out of it, each column represents a raster, rows the values
extent_list<-lapply(extent_list, as.matrix)
matrix_extent<-matrix(unlist(extent_list), ncol=length(extent_list)
rownames(matrix_extent)<-c("xmin", "ymin", "xmax", "ymax")
# create an extent with the extrem values of your extent
best_extent<-extent(min(matrix_extent[1,]), max(matrix_extent[3,]),
min(matrix_extent[2,]), max(matrix_extent[4,]))
# the range of your extent in degrees
ranges<-apply(as.matrix(best_extent), 1, diff)
# the resolution of your raster (pick one) or add a desired resolution
reso<-res(r1)
# deviding the range by your desired resolution gives you the number of rows and columns
nrow_ncol<-ranges/reso
# create your raster with the following
s<-raster(best_extent, nrows=nrow_ncol[2], ncols=nrow_ncol[1], crs=r1@crs)